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yip12 SMN complex subunit Yip12/Gem2 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 3361408, updated on 18-Sep-2024

Summary

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Official Symbol
yip12
Official Full Name
SMN complex subunit Yip12/Gem2
Primary source
PomBase:SPAPB17E12.02
Locus tag
SPOM_SPAPB17E12.02
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
yip1; yip1-b
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Genomic context

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See yip12 in Genome Data Viewer
Location:
chromosome: I
Exon count:
3
Sequence:
Chromosome: I; NC_003424.3 (1270750..1271746)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene 19S proteasome regulatory subunit Rpn501 Neighboring gene ncRNA Neighboring gene rsm22-cox11 tandem protein cox1101 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ubiquitin-protein ligase E3 Neighboring gene COP9/signalosome complex subunit Csn2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A systematic genetic screen identifies new factors influencing centromeric heterochromatin integrity in fission yeast. Bayne EH, et al. Genome Biol, 2014. PMID 25274039, Free PMC Article
  2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  3. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in spliceosomal snRNP assembly IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of SMN complex IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
SMN complex subunit Yip12/Gem2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    1270750..1271746
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018698.3 → NP_001018218.1  SMN complex subunit Yip12/Gem2 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_001018218.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0CU08, P0CU09, Q9P347
    Conserved Domains (1) summary
    pfam04938
    Location:45 → 208
    SIP1; Survival motor neuron (SMN) interacting protein 1 (SIP1)
Nucleotide Protein
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