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Ppr-Y Ppr-Y [ Drosophila melanogaster (fruit fly) ]

Gene ID: 3355180, updated on 4-Jan-2025

Summary

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Official Symbol
Ppr-Yprovided by FlyBase
Official Full Name
Ppr-Yprovided by FlyBase
Primary source
FLYBASE:FBgn0046697
Locus tag
Dmel_CG40440
See related
AllianceGenome:FB:FBgn0046697
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG40440; Dmel\CG40440; FBgn0046697; PPR; PpR-Y; PPr-Y; PprY
Summary
Predicted to be active in cilium. Orthologous to human DRC3 (dynein regulatory complex subunit 3). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See Ppr-Y in Genome Data Viewer
Location:
chromosome: Y
Exon count:
6
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) Y NC_024512.1 (1636574..1884846)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) YHet NW_001848860.1 (156742..206246)

Chromosome Y - NC_024512.1Genomic Context describing neighboring genes Neighboring gene Supressor of Stellate:CR45796 Neighboring gene long non-coding RNA:CR40629 Neighboring gene pseudo Neighboring gene pseudo Neighboring gene WD40 Y Neighboring gene pseudo

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insight Into Spinocerebellar Ataxia Type 31 (SCA31) From Drosophila Model. Ishiguro T, et al. Front Neurosci, 2021. PMID 34113230, Free PMC Article
  2. Identification of five new genes on the Y chromosome of Drosophila melanogaster. Carvalho AB, et al. Proc Natl Acad Sci U S A, 2001 Nov 6. PMID 11687639, Free PMC Article
  3. Selection and geography shape male reproductive tract transcriptomes in Drosophila melanogaster. Cridland JM, et al. Genetics, 2023 May 4. PMID 36869688, Free PMC Article
  4. Positive and purifying selection on the Drosophila Y chromosome. Singh ND, et al. Mol Biol Evol, 2014 Oct. PMID 24974375, Free PMC Article
  5. Drosophila melanogaster Y Chromosome Genes Affect Male Sensitivity to Microbial Infections. Bartolo G, et al. Insects, 2021 Jan 5. PMID 33466347, Free PMC Article

See all (33) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

mobile_element

  • Loc: 1793504-1797021 mobile_element_type = transposon:Dm88{}6511

Gene Ontology Provided by FlyBase

Component Evidence Code Pubs
is_active_in cilium IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Ppr-Y
Names
CG40440-PB
Ppr-Y-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_024512.1 Reference assembly

    Range
    1636574..1884846
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001015502.3 → NP_001015502.3  Ppr-Y [Drosophila melanogaster]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q5LJN9, Q95V50
    Conserved Domains (3) summary
    sd00031
    Location:63 → 82
    LRR_1; leucine-rich repeat [structural motif]
    pfam12799
    Location:81 → 121
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:81 → 137
    LRR_8; Leucine rich repeat
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q95V43 Q95V43
Q95V50 Q95V50

Gene LinkOut

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