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CG40439 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 3355120, updated on 18-Sep-2024

Summary

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Official Symbol
CG40439provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0058439
Locus tag
Dmel_CG40439
See related
AllianceGenome:FB:FBgn0058439
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG40439
Orthologs
all
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Genomic context

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See CG40439 in Genome Data Viewer
Location:
40F7-40F7; 2-54 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (22797519..22798276, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (22690251..22691008, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Sarcolemma associated protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR43927 Neighboring gene long non-coding RNA:CR43266 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of heterochromatic genes of Drosophila. Yasuhara JC, et al. Proc Natl Acad Sci U S A, 2005 Aug 2. PMID 16033869, Free PMC Article
  2. Modulation of Heterochromatin by Male Specific Lethal Proteins and roX RNA in Drosophila melanogaster Males. Koya SK, et al. PLoS One, 2015. PMID 26468879, Free PMC Article
  3. Genetic analysis of RpL38 and RpL5, two minute genes located in the centric heterochromatin of chromosome 2 of Drosophila melanogaster. Marygold SJ, et al. Genetics, 2005 Feb. PMID 15520262, Free PMC Article
  4. Cytogenetic and molecular characterization of heterochromatin gene models in Drosophila melanogaster. Rossi F, et al. Genetics, 2007 Feb. PMID 17110485, Free PMC Article
  5. The paradox of functional heterochromatin. Dimitri P, et al. Bioessays, 2005 Jan. PMID 15612038

See all (20) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

  • Annotated by Drosophila Heterochromatin Genome Project, Lawrence Berkeley National Lab, http://www.dhgp.org

General protein information

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Preferred Names
uncharacterized protein
Names
CG40439-PA
CG40439-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    22797519..22798276 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001042938.2 → NP_001036403.1  uncharacterized protein Dmel_CG40439, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001036403.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7PL73
    Conserved Domains (1) summary
    cl06336
    Location:8 → 88
    Commd; COMM_Domain, a family of domains found at the C-terminus of HCarG, the copper metabolism gene MURR1 product, and related proteins. Presumably all COMM_Domain containing proteins are located in the nucleus and the COMM domain plays a role in ...

  2. NM_001042939.2 → NP_001036404.1  uncharacterized protein Dmel_CG40439, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001036404.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7PL72
    Conserved Domains (1) summary
    cl06336
    Location:7 → 166
    Commd; COMM_Domain, a family of domains found at the C-terminus of HCarG, the copper metabolism gene MURR1 product, and related proteins. Presumably all COMM_Domain containing proteins are located in the nucleus and the COMM domain plays a role in ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q7PL72 Q7PL72
Q7PL73 Q7PL73

Gene LinkOut

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