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si:dkey-92k1.9 si:dkey-92k1.9 [ Danio rerio (zebrafish) ]

Gene ID: 335412, updated on 9-Dec-2024

Summary

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Official Symbol
si:dkey-92k1.9provided by ZNC
Official Full Name
si:dkey-92k1.9provided by ZNC
Primary source
ZFIN:ZDB-GENE-081031-102
See related
Ensembl:ENSDARG00000105762 AllianceGenome:ZFIN:ZDB-GENE-081031-102
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fj09g05; wu:fj09g05
Summary
Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See si:dkey-92k1.9 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 21 NC_007132.7 (25344356..25345902)
105 previous assembly GRCz10 (GCF_000002035.5) 21 NC_007132.6 (25307735..25309645)

Chromosome 21 - NC_007132.7Genomic Context describing neighboring genes Neighboring gene odorant receptor, family 92, subfamily A, member 1 Neighboring gene uncharacterized LOC137488866 Neighboring gene odorant receptor, family 92, subfamily A, member 4 Neighboring gene odorant receptor, family 92, subfamily A, member 2 Neighboring gene odorant receptor, family 92, subfamily A, member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A unified nomenclature for vertebrate olfactory receptors. Olender T, et al. BMC Evol Biol, 2020 Apr 15. PMID 32295537, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein LOC335412

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001423239.1 → NP_001410168.1  uncharacterized protein LOC335412

    Status: VALIDATED

    Source sequence(s)
    BX510938
    UniProtKB/TrEMBL
    A0A8M3AM31, A0A8M6YX70, E9QEM9, F6NN09
    Related
    ENSDARP00000115669.2, ENSDART00000144724.4

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007132.7 Reference GRCz11 Primary Assembly

    Range
    25344356..25345902
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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