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wasb WASP actin nucleation promoting factor b [ Danio rerio (zebrafish) ]

Gene ID: 335158, updated on 9-Dec-2024

Summary

Official Symbol
wasbprovided by ZNC
Official Full Name
WASP actin nucleation promoting factor bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-7098
See related
Ensembl:ENSDARG00000026350 AllianceGenome:ZFIN:ZDB-GENE-030131-7098
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
was; zgc:64164; wu:fk81c08
Summary
Predicted to enable small GTPase binding activity. Acts upstream of or within leukocyte chemotaxis; myoblast fusion; and regulation of neutrophil migration. Predicted to be located in cytoskeleton and nucleus. Predicted to be active in cytoplasm. Is expressed in hematopoietic system; leukocyte; neuromast; thrombocyte; and thymus. Used to study Wiskott-Aldrich syndrome. Human ortholog(s) of this gene implicated in Wiskott-Aldrich syndrome; X-linked severe congenital neutropenia; and thrombocytopenia. Orthologous to human WAS (WASP actin nucleation promoting factor). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See wasb in Genome Data Viewer
Location:
chromosome: 8
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (23560182..23578660, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (23538943..23557421, complement)

Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene forkhead box P3b Neighboring gene sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Gb Neighboring gene solute carrier family 38 member 5b Neighboring gene coiled-coil domain containing 22

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 
enables small GTPase binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
WASP actin nucleation promoting factor b
Names
Wiskott-Aldrich syndrome (eczema-thrombocytopenia) b
wasp1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_199938.1NP_956232.1  WASP actin nucleation promoting factor b

    See identical proteins and their annotated locations for NP_956232.1

    Status: PROVISIONAL

    Source sequence(s)
    BC053291
    UniProtKB/TrEMBL
    Q7T318
    Related
    ENSDARP00000039217.4, ENSDART00000039080.6
    Conserved Domains (2) summary
    cd01205
    Location:36135
    EVH1_WASP-like; WASP family proteins EVH1 domain
    pfam00786
    Location:220276
    PBD; P21-Rho-binding domain

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007119.7 Reference GRCz11 Primary Assembly

    Range
    23560182..23578660 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)