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aip aryl hydrocarbon receptor interacting protein [ Danio rerio (zebrafish) ]

Gene ID: 334795, updated on 9-Dec-2024

Summary

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Official Symbol
aipprovided by ZNC
Official Full Name
aryl hydrocarbon receptor interacting proteinprovided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-6735
See related
Ensembl:ENSDARG00000104437 AllianceGenome:ZFIN:ZDB-GENE-030131-6735
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
wu:fa03h10; zgc:101101
Summary
Predicted to enable peptidyl-prolyl cis-trans isomerase activity. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in pituitary adenoma 1. Orthologous to human AIP (aryl hydrocarbon receptor interacting protein). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
human mouse all
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Genomic context

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See aip in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 1 NC_007112.7 (39995074..40009755)
105 previous assembly GRCz10 (GCF_000002035.5) 1 NC_007112.6 (39276954..39291682)

Chromosome 1 - NC_007112.7Genomic Context describing neighboring genes Neighboring gene storkhead box 2a Neighboring gene superoxide dismutase 3, extracellular b Neighboring gene inhibitor of growth family, member 2 Neighboring gene cyclin dependent kinase 2 associated protein 2 Neighboring gene leucine-rich repeat LGI family, member 2b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. A temporal high-resolution investigation of the Ah-receptor pathway during early development of zebrafish (Danio rerio). Meyer-Alert H, et al. Aquat Toxicol, 2018 Nov. PMID 30245344
  2. Toxic effects and transcriptome analyses of zebrafish (Danio rerio) larvae exposed to benzophenones. Meng Q, et al. Environ Pollut, 2020 Oct. PMID 32497821
  3. Effects of tris(1,3-dichloro-2-propyl) phosphate and triphenyl phosphate on receptor-associated mRNA expression in zebrafish embryos/larvae. Liu C, et al. Aquat Toxicol, 2013 Mar 15. PMID 23306105
  4. Integrated in silico and in vivo approaches to investigate effects of BDE-99 mediated by the nuclear receptors on developing zebrafish. Zhang L, et al. Environ Toxicol Chem, 2018 Mar. PMID 29027256
  5. Differential modulation of expression of nuclear receptor mediated genes by tris(2-butoxyethyl) phosphate (TBOEP) on early life stages of zebrafish (Danio rerio). Ma Z, et al. Aquat Toxicol, 2015 Dec. PMID 26562049

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • MGC101101

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables isomerase activity IEA
Inferred from Electronic Annotation
more info
  
enables peptidyl-prolyl cis-trans isomerase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
AH receptor-interacting protein
NP_999877.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_214712.1 → NP_999877.1  AH receptor-interacting protein

    See identical proteins and their annotated locations for NP_999877.1

    Status: PROVISIONAL

    Source sequence(s)
    AF274877
    UniProtKB/TrEMBL
    Q90ZC5
    Related
    ENSDARP00000140632.1, ENSDART00000166251.2
    Conserved Domains (3) summary
    sd00006
    Location:184 → 226
    TPR; TPR repeat [structural motif]
    pfam00254
    Location:30 → 91
    FKBP_C; FKBP-type peptidyl-prolyl cis-trans isomerase
    pfam13414
    Location:245 → 297
    TPR_11; TPR repeat

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007112.7 Reference GRCz11 Primary Assembly

    Range
    39995074..40009755
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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