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CG17652 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 33353, updated on 9-Dec-2024

Summary

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Official Symbol
CG17652provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0031361
Locus tag
Dmel_CG17652
See related
AllianceGenome:FB:FBgn0031361
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG17652; UTP23
Summary
Predicted to enable small ribosomal subunit rRNA binding activity. Predicted to be part of small-subunit processome. Predicted to be active in nucleolus. Human ortholog(s) of this gene implicated in colorectal adenocarcinoma. Orthologous to human UTP23 (UTP23 small subunit processome component). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG17652 in Genome Data Viewer
Location:
22B1-22B1; 2-3 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (1731033..1732356, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (1731033..1732356, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Replication in mitochondria 2 Neighboring gene Enolase Neighboring gene Ribosomal RNA processing 40 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The chromosomes of Drosophila suzukii (Diptera: Drosophilidae): detailed photographic polytene chromosomal maps and in situ hybridization data. Drosopoulou E, et al. Mol Genet Genomics, 2019 Dec. PMID 31346719
  2. The WD40 repeat protein fritz links cytoskeletal planar polarity to frizzled subcellular localization in the Drosophila epidermis. Collier S, et al. Genetics, 2005 Apr. PMID 15654087, Free PMC Article
  3. Buffering of Genetic Regulatory Networks in Drosophila melanogaster. Fear JM, et al. Genetics, 2016 Jul. PMID 27194752, Free PMC Article
  4. Regulation of Ribosome Biogenesis and Protein Synthesis Controls Germline Stem Cell Differentiation. Sanchez CG, et al. Cell Stem Cell, 2016 Feb 4. PMID 26669894, Free PMC Article
  5. Identification of Drosophila gene products required for phagocytosis of Candida albicans. Stroschein-Stevenson SL, et al. PLoS Biol, 2006 Jan. PMID 16336044, Free PMC Article

See all (22) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables small ribosomal subunit rRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in nucleolus IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of small-subunit processome IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG17652-PA
CG17652-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    1731033..1732356 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001272952.1 → NP_001259881.1  uncharacterized protein Dmel_CG17652, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001259881.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q4V6I3, Q9VQ40
    Conserved Domains (1) summary
    cd09866
    Location:2 → 145
    PIN_Fcf1-Utp23-H; PIN domain of rRNA-processing protein Fcf1- and Utp23-like homologs found in eukaryotes except fungi

  2. NM_134773.2 → NP_608617.1  uncharacterized protein Dmel_CG17652, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_608617.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q4V6I3, Q9VQ40
    Related
    FBpp0077570
    Conserved Domains (1) summary
    cd09866
    Location:2 → 145
    PIN_Fcf1-Utp23-H; PIN domain of rRNA-processing protein Fcf1- and Utp23-like homologs found in eukaryotes except fungi
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VQ40 Q9VQ40

Gene LinkOut

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