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Nostrin nitric oxide synthase trafficker [ Mus musculus (house mouse) ]

Gene ID: 329416, updated on 27-Nov-2024

Summary

Official Symbol
Nostrinprovided by MGI
Official Full Name
nitric oxide synthase traffickerprovided by MGI
Primary source
MGI:MGI:3606242
See related
Ensembl:ENSMUSG00000034738 AllianceGenome:MGI:3606242
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Daip2; mDaIP2
Summary
Enables DNA binding activity. Acts upstream of or within negative regulation of DNA-templated transcription. Located in nucleus. Orthologous to human NOSTRIN (nitric oxide synthase trafficking). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in placenta adult (RPKM 11.0), large intestine adult (RPKM 4.4) and 11 other tissues See more
Orthologs
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Genomic context

See Nostrin in Genome Data Viewer
Location:
2 C2; 2 39.58 cM
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (68966144..69019674)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (69135800..69189330)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene ceramide synthase 6 Neighboring gene predicted gene, 52515 Neighboring gene STARR-seq mESC enhancer starr_04722 Neighboring gene STARR-seq mESC enhancer starr_04727 Neighboring gene predicted gene, 39840 Neighboring gene STARR-positive B cell enhancer ABC_E412 Neighboring gene STARR-seq mESC enhancer starr_04729 Neighboring gene SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) Neighboring gene glucose-6-phosphatase, catalytic, 2 Neighboring gene STARR-seq mESC enhancer starr_04731 Neighboring gene ATP-binding cassette, sub-family B member 11 Neighboring gene STARR-seq mESC enhancer starr_04732

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (4) 
  • Targeted (2)  1 citation

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in endocytosis IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within negative regulation of DNA-templated transcription IDA
Inferred from Direct Assay
more info
PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
nostrin
Names
Dab2-interacting protein 2
disabled homolog 2-interacting protein 2
eNOS-trafficking inducer
probable ortholog of human nitric oxide synthase trafficker (NOSTRIN)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_181547.3NP_853525.3  nostrin

    See identical proteins and their annotated locations for NP_853525.3

    Status: VALIDATED

    Source sequence(s)
    BC069942, BY061165
    Consensus CDS
    CCDS16087.1
    UniProtKB/Swiss-Prot
    Q6WKZ7, Q7TSK5, Q8BWC2
    Related
    ENSMUSP00000036923.8, ENSMUST00000041865.8
    Conserved Domains (2) summary
    cd07658
    Location:8250
    F-BAR_NOSTRIN; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Nitric Oxide Synthase TRaffic INducer (NOSTRIN)
    cd11823
    Location:443494
    SH3_Nostrin; Src homology 3 domain of Nitric Oxide Synthase TRaffic INducer

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    68966144..69019674
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)