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zgc:66473 zgc:66473 [ Danio rerio (zebrafish) ]

Gene ID: 327497, updated on 9-Dec-2024

Summary

Official Symbol
zgc:66473provided by ZNC
Official Full Name
zgc:66473provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-5708
See related
AllianceGenome:ZFIN:ZDB-GENE-030131-5708
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fi14d06; wu:fi14d06
Summary
Predicted to enable GTPase activity and molecular adaptor activity. Predicted to be involved in cytoskeleton-dependent cytokinesis and protein localization. Predicted to be part of septin complex. Predicted to be active in cell division site; microtubule cytoskeleton; and septin ring. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

See zgc:66473 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (2427615..2430286, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (2619125..2622240, complement)

Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene si:dkey-187j14.1 Neighboring gene ice-structuring glycoprotein-like Neighboring gene uncharacterized LOC137496085 Neighboring gene uncharacterized LOC110439912

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 
enables GTPase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables molecular adaptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in cytoskeleton-dependent cytokinesis IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in protein localization IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in cell division site IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in microtubule cytoskeleton IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of septin complex IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in septin ring IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
uncharacterized protein LOC327497

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_199814.2NP_956108.1  uncharacterized protein LOC327497

    See identical proteins and their annotated locations for NP_956108.1

    Status: PREDICTED

    Source sequence(s)
    BC054709
    UniProtKB/TrEMBL
    Q7SYJ0
    Conserved Domains (1) summary
    cd00882
    Location:57233
    Ras_like_GTPase; Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases)

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007118.7 Reference GRCz11 Primary Assembly

    Range
    2427615..2430286 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)