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pgam1b phosphoglycerate mutase 1b [ Danio rerio (zebrafish) ]

Gene ID: 327165, updated on 4-Jan-2025

Summary

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Official Symbol
pgam1bprovided by ZNC
Official Full Name
phosphoglycerate mutase 1bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-5376
See related
Ensembl:ENSDARG00000014068 AllianceGenome:ZFIN:ZDB-GENE-030131-5376
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fd15c02; pgam1lb; zgc:63722; wu:fd15c02
Summary
Predicted to enable 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity and bisphosphoglycerate mutase activity. Predicted to act upstream of or within glycolytic process. Is expressed in cardiac ventricle and liver. Orthologous to several human genes including PGAM1 (phosphoglycerate mutase 1). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See pgam1b in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 1 NC_007112.7 (54707662..54718819, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 1 NC_007112.6 (54030011..54041168, complement)

Chromosome 1 - NC_007112.7Genomic Context describing neighboring genes Neighboring gene lysine-rich nucleolar protein 1 Neighboring gene exosome component 1 Neighboring gene cell division cycle 25 homolog d Neighboring gene phosphatidylinositol 4-kinase type 2 alpha

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. FOXN3 Regulates Hepatic Glucose Utilization. Karanth S, et al. Cell Rep, 2016 Jun 21. PMID 27292639, Free PMC Article
  2. The proteomic study on cellular responses of the testes of zebrafish (Danio rerio) exposed to microcystin-RR. Zhao S, et al. Proteomics, 2012 Jan. PMID 22140076
  3. Proteome-driven elucidation of adaptive responses to combined vitamin E and C deficiency in zebrafish. Motorykin I, et al. J Proteome Res, 2014 Mar 7. PMID 24476500, Free PMC Article
  4. A regeneration-triggered metabolic adaptation is necessary for cell identity transitions and cell cycle re-entry to support blastema formation and bone regeneration. Brandão AS, et al. Elife, 2022 Aug 22. PMID 35993337, Free PMC Article
  5. Stimulation of glycolysis promotes cardiomyocyte proliferation after injury in adult zebrafish. Fukuda R, et al. EMBO Rep, 2020 Aug 5. PMID 32648304, Free PMC Article

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity IEA
Inferred from Electronic Annotation
more info
  
enables bisphosphoglycerate mutase activity IEA
Inferred from Electronic Annotation
more info
  
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
  
enables intramolecular phosphotransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables isomerase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within glycolytic process IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
phosphoglycerate mutase 1b
Names
phosphoglycerate mutase 1 like b
NP_958457.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_201300.2 → NP_958457.2  phosphoglycerate mutase 1b

    Status: VALIDATED

    Source sequence(s)
    BX119918
    UniProtKB/TrEMBL
    A0A8M1PEA1, B8A4H6
    Related
    ENSDARP00000108556.2, ENSDART00000122601.4
    Conserved Domains (1) summary
    PRK14115
    Location:4 → 253
    gpmA; phosphoglyceromutase; Provisional

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007112.7 Reference GRCz11 Primary Assembly

    Range
    54707662..54718819 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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