U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

tbc1d10aa TBC1 domain family, member 10Aa [ Danio rerio (zebrafish) ]

Gene ID: 325772, updated on 4-Jan-2025

Summary

Go to the top of the page Help
Official Symbol
tbc1d10aaprovided by ZNC
Official Full Name
TBC1 domain family, member 10Aaprovided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-4497
See related
Ensembl:ENSDARG00000102070 AllianceGenome:ZFIN:ZDB-GENE-030131-4497
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fd11a11; wu:fd11a11; si:ch211-87l2.1
Summary
Is expressed in brain; head; otic vesicle; pectoral fin; and ventral mesoderm. Orthologous to human TBC1D10A (TBC1 domain family member 10A). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See tbc1d10aa in Genome Data Viewer
Location:
chromosome: 8
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (40426766..40452016, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (40387181..40412467, complement)

Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene ORAI calcium release-activated calcium modulator 1a Neighboring gene apelin receptor a Neighboring gene myosin, light chain 7, regulatory Neighboring gene glucokinase (hexokinase 4)

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Embryonic expression patterns of TBC1D10 subfamily genes in zebrafish. Sun S, et al. Gene Expr Patterns, 2022 Mar. PMID 34843939
  2. Characterization of the Apelin/Elabela Receptors (APLNR) in Chickens, Turtles, and Zebrafish: Identification of a Novel Apelin-Specific Receptor in Teleosts. Zhang J, et al. Front Endocrinol (Lausanne), 2018. PMID 30631305, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

General protein information

Go to the top of the page Help
Preferred Names
TBC1 domain family member 10A; TBC1 domain family, member 10Aa

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007119.7 Reference GRCz11 Primary Assembly

    Range
    40426766..40452016 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009304172.3 → XP_009302447.1  TBC1 domain family member 10A

    UniProtKB/TrEMBL
    A0A8M3BBZ7
    Related
    ENSDARP00000131583.1, ENSDART00000157698.2
    Conserved Domains (1) summary
    pfam00566
    Location:142 → 305
    RabGAP-TBC; Rab-GTPase-TBC domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools