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Nipsnap nipsnap [ Drosophila melanogaster (fruit fly) ]

Gene ID: 32573, updated on 9-Dec-2024

Summary

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Official Symbol
Nipsnapprovided by FlyBase
Official Full Name
nipsnapprovided by FlyBase
Primary source
FLYBASE:FBgn0030724
Locus tag
Dmel_CG9212
See related
AllianceGenome:FB:FBgn0030724
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG9212; Dmel\CG9212
Summary
Predicted to be involved in mitochondrion organization and oxidative phosphorylation. Predicted to be located in mitochondrial outer membrane. Predicted to be active in mitochondrion. Is expressed in adult head; adult heart; embryonic/larval midgut; gastric caecum; and organism. Orthologous to human NIPSNAP1 (nipsnap homolog 1) and NIPSNAP2 (nipsnap homolog 2). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

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See Nipsnap in Genome Data Viewer
Location:
14A7-14A8; 1-52 cM
Exon count:
6
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (16070365..16073568, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (15964398..15967601, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene defective proboscis extension response 18 Neighboring gene Transducer of ERBB2 Neighboring gene mir-4958 stem loop Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. NELF and GAGA factor are linked to promoter-proximal pausing at many genes in Drosophila. Lee C, et al. Mol Cell Biol, 2008 May. PMID 18332113, Free PMC Article
  2. Novel perspectives of target-binding by the evolutionarily conserved PP4 phosphatase. Karman Z, et al. Open Biol, 2020 Dec. PMID 33352067, Free PMC Article
  3. A cis-regulatory-directed pipeline for the identification of genes involved in cardiac development and disease. Nim HT, et al. Genome Biol, 2021 Dec 15. PMID 34906219, Free PMC Article
  4. The Extracellular and Cytoplasmic Domains of Syndecan Cooperate Postsynaptically to Promote Synapse Growth at the Drosophila Neuromuscular Junction. Nguyen MU, et al. PLoS One, 2016. PMID 26987116, Free PMC Article
  5. Regulators of autophagosome formation in Drosophila muscles. Zirin J, et al. PLoS Genet, 2015 Feb. PMID 25692684, Free PMC Article

See all (30) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in mitochondrion organization ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in oxidative phosphorylation ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
located_in mitochondrial outer membrane ISS
Inferred from Sequence or Structural Similarity
more info
  
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
nipsnap
Names
CG9212-PA
CG9212-PB
CG9212-PC
CG9212-PF
Nipsnap-PA
Nipsnap-PB
Nipsnap-PC
Nipsnap-PF

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    16070365..16073568 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_167484.3 → NP_727932.1  nipsnap, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_727932.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A4V4K8, Q9U5W0, Q9VXK0
    UniProtKB/TrEMBL
    M9PJP0
    Related
    FBpp0074034
    Conserved Domains (1) summary
    pfam07978
    Location:174 → 271
    NIPSNAP; NIPSNAP

  2. NM_132875.4 → NP_573103.1  nipsnap, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_573103.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A4V4K8, Q9U5W0, Q9VXK0
    UniProtKB/TrEMBL
    M9PJP0
    Related
    FBpp0074036
    Conserved Domains (1) summary
    pfam07978
    Location:174 → 271
    NIPSNAP; NIPSNAP

  3. NM_167483.3 → NP_727931.1  nipsnap, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_727931.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A4V4K8, Q9U5W0, Q9VXK0
    UniProtKB/TrEMBL
    M9PJP0
    Related
    FBpp0074035
    Conserved Domains (1) summary
    pfam07978
    Location:174 → 271
    NIPSNAP; NIPSNAP

  4. NM_001298387.1 → NP_001285316.1  nipsnap, isoform F [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001285316.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A4V4K8, Q9U5W0, Q9VXK0
    UniProtKB/TrEMBL
    M9PJP0
    Conserved Domains (1) summary
    pfam07978
    Location:174 → 271
    NIPSNAP; NIPSNAP
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
M9PJP0 M9PJP0
Q9VXK0.2 Q9VXK0

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