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wu:fc34e06 wu:fc34e06 [ Danio rerio (zebrafish) ]

Gene ID: 324610, updated on 9-Dec-2024

Summary

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Official Symbol
wu:fc34e06provided by ZNC
Official Full Name
wu:fc34e06provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-3331
See related
AllianceGenome:ZFIN:ZDB-GENE-030131-3331
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fc34e06
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See wu:fc34e06 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
60
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 1 NC_007112.7 (40663497..40704563)
105 previous assembly GRCz10 (GCF_000002035.5) 1 NC_007112.6 (39965453..39986492)

Chromosome 1 - NC_007112.7Genomic Context describing neighboring genes Neighboring gene N-alpha-acetyltransferase 15, NatA auxiliary subunit b Neighboring gene ras-related protein Rab-33B Neighboring gene uncharacterized LOC137493459 Neighboring gene mucin-2-like Neighboring gene zgc:153642

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Hypoxia-inducible factor 3 is an oxygen-dependent transcription activator and regulates a distinct transcriptional response to hypoxia. Zhang P, et al. Cell Rep, 2014 Mar 27. PMID 24613356

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by ZFIN

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
serine-rich adhesin for platelets; uncharacterized protein LOC324610

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007112.7 Reference GRCz11 Primary Assembly

    Range
    40663497..40704563
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021476836.2 → XP_021332511.2  serine-rich adhesin for platelets

Nucleotide Protein Strain
Heading Accession and Version

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