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CG14414 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 32394, updated on 9-Dec-2024

Summary

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Official Symbol
CG14414provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0030571
Locus tag
Dmel_CG14414
See related
AllianceGenome:FB:FBgn0030571
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BcDNA:AT01764; cg14414; Dmel\CG14414
Summary
Predicted to enable mRNA binding activity. Is expressed in several structures, including anterior endoderm; inclusive hindgut primordium; mesoderm; and posterior endoderm. Orthologous to human RBM18 (RNA binding motif protein 18). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

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See CG14414 in Genome Data Viewer
Location:
12F1-12F1; 1-49 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (14580600..14582174)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (14474633..14476207)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44110 Neighboring gene long non-coding RNA:CR45521 Neighboring gene nmdyn-D6 Neighboring gene mitochondrial ribosomal protein S25 Neighboring gene sobremesa

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The drosophila melanogaster genome: translation factors and RNA binding proteins. Lasko P. J Cell Biol, 2000 Jul 24. PMID 10908586, Free PMC Article
  2. Putative synaptic genes defined from a Drosophila whole body developmental transcriptome by a machine learning approach. Pazos Obregón F, et al. BMC Genomics, 2015 Sep 15. PMID 26370122, Free PMC Article
  3. Genes conserved in bilaterians but jointly lost with Myc during nematode evolution are enriched in cell proliferation and cell migration functions. Erives AJ. Dev Genes Evol, 2015 Sep. PMID 26173873, Free PMC Article
  4. Transient junction anisotropies orient annular cell polarization in the Drosophila airway tubes. Hosono C, et al. Nat Cell Biol, 2015 Dec. PMID 26551273
  5. Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes. López-Varea A, et al. G3 (Bethesda), 2021 Dec 8. PMID 34599810, Free PMC Article

See all (26) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables RNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables RNA binding IEA
Inferred from Electronic Annotation
more info
  
enables mRNA binding ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
Names
CG14414-PA
CG14414-PC
CG14414-PD
CG14414-PE
NP_727783.3
  • unusual splice

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    14580600..14582174
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_176729.3 → NP_788902.1  uncharacterized protein Dmel_CG14414, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_788902.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8MZG3, Q8SY84
    Related
    FBpp0073749
    Conserved Domains (2) summary
    COG0724
    Location:11 → 61
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cl17169
    Location:1 → 50
    RRM_SF; RNA recognition motif (RRM) superfamily

  2. NM_001298311.1 → NP_001285240.1  uncharacterized protein Dmel_CG14414, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001285240.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    X2JBU2
    Conserved Domains (2) summary
    COG0724
    Location:22 → 126
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12355
    Location:28 → 115
    RRM_RBM18; RNA recognition motif in eukaryotic RNA-binding protein 18 and similar proteins

  3. NM_167410.4 → NP_727783.3  uncharacterized protein Dmel_CG14414, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_727783.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VY29
    Conserved Domains (2) summary
    COG0724
    Location:22 → 118
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12355
    Location:28 → 107
    RRM_RBM18; RNA recognition motif in eukaryotic RNA-binding protein 18 and similar proteins

  4. NM_132736.3 → NP_572964.1  uncharacterized protein Dmel_CG14414, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_572964.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8MZG3, Q8SY84
    Related
    FBpp0073747
    Conserved Domains (2) summary
    COG0724
    Location:11 → 61
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cl17169
    Location:1 → 50
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8MZG3 Q8MZG3
Q8SY84 Q8SY84
Q9VY29 Q9VY29
X2JBU2 X2JBU2

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