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DET_RS05465 MBL fold metallo-hydrolase RNA specificity domain-containing protein [ Dehalococcoides mccartyi 195 ]

Gene ID: 3229629, updated on 11-Dec-2024

Summary

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Gene symbol
DET_RS05465
Gene description
MBL fold metallo-hydrolase RNA specificity domain-containing protein
Locus tag
DET_RS05465
Gene type
protein coding
Organism
Dehalococcoides mccartyi 195 (strain: 195, type-material: type strain of Dehalococcoides mccartyi)
Lineage
Bacteria; Bacillati; Chloroflexota; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides
Old locus tag
DET1061
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Genomic context

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Sequence:
NC_002936.3 (961200..962606)

NC_002936.3Genomic Context describing neighboring genes Neighboring gene response regulator transcription factor Neighboring gene cell wall metabolism sensor histidine kinase WalK Neighboring gene response regulator transcription factor Neighboring gene PAS domain S-box protein Neighboring gene class I SAM-dependent RNA methyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002936.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Crystal structure of an archaeal cleavage and polyadenylation specificity factor subunit from Pyrococcus horikoshii. Nishida Y, et al. Proteins, 2010 Aug 1. PMID 20544974
  2. Polyadenylation factor CPSF-73 is the pre-mRNA 3'-end-processing endonuclease. Mandel CR, et al. Nature, 2006 Dec 14. PMID 17128255, Free PMC Article
  3. Metallo-beta-lactamase fold within nucleic acids processing enzymes: the beta-CASP family. Callebaut I, et al. Nucleic Acids Res, 2002 Aug 15. PMID 12177301, Free PMC Article
  4. Characterization of components of the Staphylococcus aureus mRNA degradosome holoenzyme-like complex. Roux CM, et al. J Bacteriol, 2011 Oct. PMID 21764917, Free PMC Article
  5. Genome sequence of the PCE-dechlorinating bacterium Dehalococcoides ethenogenes. Seshadri R, et al. Science, 2005 Jan 7. PMID 15637277

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
MBL fold metallo-hydrolase RNA specificity domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002936.3 Reference assembly

    Range
    961200..962606
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010936755.1 MBL fold metallo-hydrolase RNA specificity domain-containing protein [Dehalococcoides mccartyi]

    See identical proteins and their annotated locations for WP_010936755.1

    UniProtKB/TrEMBL
    Q3Z7M3
Nucleotide Protein
Heading Accession and Version