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CG15312 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 31940, updated on 4-Jan-2025

Summary

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Official Symbol
CG15312provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0030174
Locus tag
Dmel_CG15312
See related
AllianceGenome:FB:FBgn0030174
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CT35293; Dmel\CG15312
Summary
Predicted to be active in neuron projection. Is expressed in organism. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See CG15312 in Genome Data Viewer
Location:
9B1-9B1; 1-31 cM
Exon count:
6
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (10055629..10070868, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (9949662..9964901, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR45601 Neighboring gene Yolk protein 2 Neighboring gene Yolk protein 1 Neighboring gene Gustatory receptor 9a Neighboring gene long non-coding RNA:CR45602 Neighboring gene ZAP3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The MTE, a new core promoter element for transcription by RNA polymerase II. Lim CY, et al. Genes Dev, 2004 Jul 1. PMID 15231738, Free PMC Article
  2. Coordination of alternative splicing and alternative polyadenylation revealed by targeted long read sequencing. Zhang Z, et al. Nat Commun, 2023 Sep 7. PMID 37679364, Free PMC Article
  3. Quantitative trait loci affecting starvation resistance in Drosophila melanogaster. Harbison ST, et al. Genetics, 2004 Apr. PMID 15126400, Free PMC Article
  4. Spatial and temporal control of gene expression in Drosophila using the inducible GeneSwitch GAL4 system. I. Screen for larval nervous system drivers. Nicholson L, et al. Genetics, 2008 Jan. PMID 18202369, Free PMC Article
  5. Genetic basis of wing morphogenesis in Drosophila: sexual dimorphism and non-allometric effects of shape variation. Carreira VP, et al. BMC Dev Biol, 2011 Jun 2. PMID 21635778, Free PMC Article

See all (27) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Component Evidence Code Pubs
is_active_in neuron projection IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG15312-PA
CG15312-PB
CG15312-PC
CG15312-PD
CG15312-PE
CG15312-PF

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    10055629..10070868 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001258675.2 → NP_001245604.1  uncharacterized protein Dmel_CG15312, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001245604.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9NG77
    Conserved Domains (2) summary
    smart00408
    Location:40 → 90
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:40 → 90
    IG_like; Immunoglobulin like

  2. NM_167216.3 → NP_727391.1  uncharacterized protein Dmel_CG15312, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_727391.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q95TL2, Q9W2Y8
    Related
    FBpp0071358
    Conserved Domains (2) summary
    smart00408
    Location:40 → 90
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:40 → 90
    IG_like; Immunoglobulin like

  3. NM_001258674.2 → NP_001245603.1  uncharacterized protein Dmel_CG15312, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001245603.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9NDT2
    Conserved Domains (2) summary
    smart00408
    Location:40 → 90
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:40 → 90
    IG_like; Immunoglobulin like

  4. NM_167215.3 → NP_727390.1  uncharacterized protein Dmel_CG15312, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_727390.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q95TL2, Q9W2Y8
    Related
    FBpp0071357
    Conserved Domains (2) summary
    smart00408
    Location:40 → 90
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:40 → 90
    IG_like; Immunoglobulin like

  5. NM_001258676.2 → NP_001245605.1  uncharacterized protein Dmel_CG15312, isoform F [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001245605.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q95TL2, Q9W2Y8
    Conserved Domains (2) summary
    smart00408
    Location:40 → 90
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:40 → 90
    IG_like; Immunoglobulin like

  6. NM_132373.4 → NP_572601.1  uncharacterized protein Dmel_CG15312, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_572601.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q95TL2, Q9W2Y8
    Related
    FBpp0071356
    Conserved Domains (2) summary
    smart00408
    Location:40 → 90
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:40 → 90
    IG_like; Immunoglobulin like
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
M9NDT2 M9NDT2
M9NG77 M9NG77
Q9W2Y8 Q9W2Y8

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