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CG31922 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 319028, updated on 9-Dec-2024

Summary

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Official Symbol
CG31922provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0051922
Locus tag
Dmel_CG31922
See related
AllianceGenome:FB:FBgn0051922
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
20K; anon-AE003587.1; Dmel\CG31922
Summary
Predicted to enable zinc ion binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be part of U12-type spliceosomal complex and small nuclear ribonucleoprotein complex. Orthologous to human ZMAT5 (zinc finger matrin-type 5). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG31922 in Genome Data Viewer
Location:
21F1-21F2; 2-2 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (1170181..1170789)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (1170181..1170789)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Integrator 14 Neighboring gene uncharacterized protein Neighboring gene Phospholipase A2 activator protein Neighboring gene charon Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Minor Spliceosomal 65K/RNPC3 Interacts with ANKRD11 and Mediates HDAC3-Regulated Histone Deacetylation and Transcription. Li CH, et al. Adv Sci (Weinh), 2024 Aug. PMID 38837887, Free PMC Article
  2. Identification of an evolutionarily divergent U11 small nuclear ribonucleoprotein particle in Drosophila. Schneider C, et al. Proc Natl Acad Sci U S A, 2004 Jun 29. PMID 15210936, Free PMC Article
  3. Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes. López-Varea A, et al. G3 (Bethesda), 2021 Dec 8. PMID 34599810, Free PMC Article
  4. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article
  5. A global in vivo Drosophila RNAi screen identifies NOT3 as a conserved regulator of heart function. Neely GG, et al. Cell, 2010 Apr 2. PMID 20371351, Free PMC Article

See all (22) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in alternative mRNA splicing, via spliceosome IC
Inferred by Curator
more info
 PubMed 
involved_in alternative mRNA splicing, via spliceosome IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
part_of U11/U12 snRNP IDA
Inferred from Direct Assay
more info
 PubMed 
part_of U12-type spliceosomal complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of U12-type spliceosomal complex IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
Names
CG31922-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    1170181..1170789
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_164408.2 → NP_722687.1  uncharacterized protein Dmel_CG31922 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_722687.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q4V6M0, Q8IPW7
    Related
    FBpp0077630
    Conserved Domains (1) summary
    cl22907
    Location:3 → 39
    zf-U1; U1 zinc finger
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8IPW7 Q8IPW7

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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