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CG42355 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 317969, updated on 4-Jan-2025

Summary

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Official Symbol
CG42355provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0259701
Locus tag
Dmel_CG42355
See related
AllianceGenome:FB:FBgn0259701
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG32308; Dmel\CG42355
Old locus tag
Dmel_CG32308
Summary
Predicted to be involved in sperm DNA condensation. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See CG42355 in Genome Data Viewer
Location:
62C2-62C2; 3-1.5 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (2037371..2038224, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (2037371..2038224, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Gustatory receptor-like 62b Neighboring gene Gustatory receptor-like 62c Neighboring gene sallimus Neighboring gene antisense RNA:CR42860 Neighboring gene antisense RNA:CR45802 Neighboring gene zormin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The HMG-box-containing proteins tHMG-1 and tHMG-2 interact during the histone-to-protamine transition in Drosophila spermatogenesis. Gärtner SM, et al. Eur J Cell Biol, 2015 Jan. PMID 25464903
  2. The RNA export factor, Nxt1, is required for tissue specific transcriptional regulation. Caporilli S, et al. PLoS Genet, 2013 Jun. PMID 23754955, Free PMC Article
  3. A Testis-Specific Chaperone and the Chromatin Remodeler ISWI Mediate Repackaging of the Paternal Genome. Doyen CM, et al. Cell Rep, 2015 Nov 17. PMID 26549447
  4. Transition from a nucleosome-based to a protamine-based chromatin configuration during spermiogenesis in Drosophila. Rathke C, et al. J Cell Sci, 2007 May 1. PMID 17452629
  5. Characteristics and expression of lncRNA and transposable elements in Drosophila aneuploidy. Zhang S, et al. iScience, 2023 Dec 15. PMID 38125016, Free PMC Article

See all (22) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
involved_in sperm DNA condensation IEA
Inferred from Electronic Annotation
more info
  
involved_in spermatogenesis IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG42355-PC
CG42355-PD

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    2037371..2038224 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001299982.1 → NP_001286911.1  uncharacterized protein Dmel_CG42355, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001286911.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B9A0M4, Q29QZ5, Q8IRG2
    Conserved Domains (1) summary
    pfam06382
    Location:105 → 161
    DUF1074; Protein of unknown function (DUF1074)

  2. NM_001104008.3 → NP_001097478.3  uncharacterized protein Dmel_CG42355, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001097478.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    B9A0M4, Q29QZ5, Q8IRG2
    Conserved Domains (1) summary
    pfam06382
    Location:105 → 161
    DUF1074; Protein of unknown function (DUF1074)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
B9A0M4 B9A0M4

Gene LinkOut

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