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CG12541 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 31650, updated on 4-Jan-2025

Summary

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Official Symbol
CG12541provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0029930
Locus tag
Dmel_CG12541
See related
AllianceGenome:FB:FBgn0029930
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG12541
Summary
Predicted to be involved in positive regulation of macroautophagy. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See CG12541 in Genome Data Viewer
Location:
6E4-6F1; 1-19 cM
Exon count:
6
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (7021608..7066052, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (6915641..6960085, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene nullo Neighboring gene uncharacterized protein Neighboring gene Sex lethal Neighboring gene mir-4956 stem loop

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Iditarod, a Drosophila homolog of the Irisin precursor FNDC5, is critical for exercise performance and cardiac autophagy. Cobb T, et al. Proc Natl Acad Sci U S A, 2023 Sep 26. PMID 37722048, Free PMC Article
  2. Identification of expressed transposable element insertions in the sequenced genome of Drosophila melanogaster. Deloger M, et al. Gene, 2009 Jun 15. PMID 19332112
  3. Single cell transcriptome atlas of the Drosophila larval brain. Brunet Avalos C, et al. Elife, 2019 Nov 20. PMID 31746739, Free PMC Article
  4. A single-cell transcriptomic atlas of complete insect nervous systems across multiple life stages. Corrales M, et al. Neural Dev, 2022 Aug 24. PMID 36002881, Free PMC Article
  5. Expansion of the mutually exclusive spliced exome in Drosophila. Hatje K, et al. Nat Commun, 2013. PMID 24025855

See all (24) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in positive regulation of macroautophagy IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG12541-PD
CG12541-PE

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    7021608..7066052 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_132150.3 → NP_572378.3  uncharacterized protein Dmel_CG12541, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_572378.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q059A1, Q0KHV3, Q9W3T1
    Conserved Domains (1) summary
    pfam16066
    Location:119 → 255
    DUF4808; Domain of unknown function (DUF4808)

  2. NM_001042797.2 → NP_001036262.2  uncharacterized protein Dmel_CG12541, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001036262.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q059A1, Q0KHV3, Q9W3T1
    Conserved Domains (1) summary
    pfam16066
    Location:119 → 255
    DUF4808; Domain of unknown function (DUF4808)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9W3T1 Q9W3T1

Gene LinkOut

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