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CG12684 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 31390, updated on 18-Sep-2024

Summary

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Official Symbol
CG12684provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0029717
Locus tag
Dmel_CG12684
See related
AllianceGenome:FB:FBgn0029717
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG12684
Orthologs
all
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Genomic context

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See CG12684 in Genome Data Viewer
Location:
4C8-4C8; 1-8 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (4570991..4571929, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (4465024..4465962, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR32773 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Alstrom syndrome 1b Neighboring gene pebbled

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Chromosomal distribution of PcG proteins during Drosophila development. Nègre N, et al. PLoS Biol, 2006 Jun. PMID 16613483, Free PMC Article
  2. Novel protein domains and repeats in Drosophila melanogaster: insights into structure, function, and evolution. Ponting CP, et al. Genome Res, 2001 Dec. PMID 11731489
  3. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article
  4. CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans. Wei P, et al. Genome Res, 2020 Jan. PMID 31722958, Free PMC Article
  5. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208

See all (22) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein
Names
CG12684-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    4570991..4571929 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_131945.2 → NP_572173.1  uncharacterized protein Dmel_CG12684 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_572173.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9W4J2
    Related
    FBpp0070665
    Conserved Domains (1) summary
    smart00714
    Location:159 → 219
    LITAF; Possible membrane-associated motif in LPS-induced tumor necrosis factor alpha factor (LITAF), also known as PIG7, and other animal proteins
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9W4J2 Q9W4J2

Gene LinkOut

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