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CG11444 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 31388, updated on 9-Dec-2024

Summary

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Official Symbol
CG11444provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0029715
Locus tag
Dmel_CG11444
See related
AllianceGenome:FB:FBgn0029715
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG11444
Summary
Predicted to enable RNA binding activity. Predicted to be active in cytosol. Is expressed in several structures, including embryonic/larval midgut primordium; ganglia; gut section; mesoderm; and visceral mesoderm derivative. Orthologous to human PDAP1 (PDGFA associated protein 1). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

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See CG11444 in Genome Data Viewer
Location:
4C7-4C7; 1-8 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (4553117..4554398, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (4447150..4448431, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR32773 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A widespread family of heat-resistant obscure (Hero) proteins protect against protein instability and aggregation. Tsuboyama K, et al. PLoS Biol, 2020 Mar. PMID 32163402, Free PMC Article
  2. FlyAtlas 2 in 2022: enhancements to the Drosophila melanogaster expression atlas. Krause SA, et al. Nucleic Acids Res, 2022 Jan 7. PMID 34718735, Free PMC Article
  3. Neuronal remodeling during metamorphosis is regulated by the alan shepard (shep) gene in Drosophila melanogaster. Chen D, et al. Genetics, 2014 Aug. PMID 24931409, Free PMC Article
  4. Genome-scale functional characterization of Drosophila developmental enhancers in vivo. Kvon EZ, et al. Nature, 2014 Aug 7. PMID 24896182
  5. A genome-wide resource for the analysis of protein localisation in Drosophila. Sarov M, et al. Elife, 2016 Feb 20. PMID 26896675, Free PMC Article

See all (29) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables RNA binding ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG11444-PA
CG11444-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    4553117..4554398 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001297934.1 → NP_001284863.1  uncharacterized protein Dmel_CG11444, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001284863.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9W4J4
    Conserved Domains (1) summary
    pfam10252
    Location:115 → 190
    PP28; Casein kinase substrate phosphoprotein PP28

  2. NM_131943.5 → NP_572171.1  uncharacterized protein Dmel_CG11444, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_572171.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9W4J4
    Related
    FBpp0070666
    Conserved Domains (1) summary
    pfam10252
    Location:115 → 190
    PP28; Casein kinase substrate phosphoprotein PP28
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9W4J4 Q9W4J4

Gene LinkOut

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