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CG15570 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 31366, updated on 9-Dec-2024

Summary

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Official Symbol
CG15570provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0029697
Locus tag
Dmel_CG15570
See related
AllianceGenome:FB:FBgn0029697
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG15570
Summary
Predicted to enable RNA polymerase II complex binding activity. Predicted to be involved in mRNA 3'-end processing. Located in egg chorion. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG15570 in Genome Data Viewer
Location:
4B3-4B3; 1-7 cM
Exon count:
14
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (4218170..4223331)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (4112203..4117364)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene femcoat Neighboring gene Mucin 4B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of New Regulators of the Oocyte-to-Embryo Transition in Drosophila. Avilés-Pagán EE, et al. G3 (Bethesda), 2020 Sep 2. PMID 32690584, Free PMC Article
  2. Painting of Fourth and the X-Linked 1.688 Satellite in D. melanogaster is Involved in Chromosome-Wide Gene Regulation. Ekhteraei-Tousi S, et al. Cells, 2020 Jan 30. PMID 32019091, Free PMC Article
  3. Drosophila MSL complex globally acetylates H4K16 on the male X chromosome for dosage compensation. Gelbart ME, et al. Nat Struct Mol Biol, 2009 Aug. PMID 19648925, Free PMC Article
  4. MSL complex is attracted to genes marked by H3K36 trimethylation using a sequence-independent mechanism. Larschan E, et al. Mol Cell, 2007 Oct 12. PMID 17936709
  5. Epi-MEIF: detecting higher order epistatic interactions for complex traits using mixed effect conditional inference forests. Saha S, et al. Nucleic Acids Res, 2022 Oct 28. PMID 36107776, Free PMC Article

See all (31) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables RNA polymerase II complex binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in mRNA 3'-end processing IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in egg chorion IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
Names
CG15570-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    4218170..4223331
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_131926.2 → NP_572154.1  uncharacterized protein Dmel_CG15570 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_572154.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9W4M4
    Related
    FBpp0070613
    Conserved Domains (3) summary
    pfam04886
    Location:1220 → 1253
    PT; PT repeat
    pfam10349
    Location:1244 → 1324
    WWbp; WW-domain ligand protein
    pfam15356
    Location:1224 → 1331
    SPR1; Psoriasis susceptibility locus 2
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9W4M4 Q9W4M4

Gene LinkOut

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