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pcx pecanex [ Drosophila melanogaster (fruit fly) ]

Gene ID: 31204, updated on 9-Dec-2024

Summary

Official Symbol
pcxprovided by FlyBase
Official Full Name
pecanexprovided by FlyBase
Primary source
FLYBASE:FBgn0003048
Locus tag
Dmel_CG3443
See related
AllianceGenome:FB:FBgn0003048
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG3443; Dmel\CG3443; DMPCX; EG:30B8.4; fs(1)12-1012; fs(1)12-1743; fs(1)12-2135; fs(1)12-3014; fs(1)12-3102; fs(1)12-4169; fs(1)14-1153; fs(1)14-567; fs(1)A387; fs(1)M10; fs(1)pcx; mel(1)R; mel(1)R1
Summary
Involved in endoplasmic reticulum organization. Located in endoplasmic reticulum. Is expressed in organism. Orthologous to several human genes including PCNX3 (pecanex 3). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See pcx in Genome Data Viewer
Location:
2F1-2F1; 1-0.9 cM
Exon count:
10
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (2225296..2238045)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (2119329..2132078)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene Vinculin Neighboring gene uncharacterized protein Neighboring gene kurz Neighboring gene female sterile (1) K10 Neighboring gene Odorant receptor 2a

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
pecanex
Names
CG3443-PC
CG3443-PE
CG3443-PF
pcx-PC
pcx-PE
pcx-PF

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    2225296..2238045
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001272254.2NP_001259183.2  pecanex, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001259183.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9PGU2
    Conserved Domains (2) summary
    pfam05041
    Location:25232746
    Pecanex_C; Pecanex protein (C-terminus)
    pfam15847
    Location:27792842
    Loricrin; Major keratinocyte cell envelope protein
  2. NM_001272253.1NP_001259182.1  pecanex, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001259182.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O46074, P18490, Q95TI6, Q9W506
    UniProtKB/TrEMBL
    M9PGB7
    Conserved Domains (2) summary
    pfam05041
    Location:25192742
    Pecanex_C; Pecanex protein (C-terminus)
    pfam15847
    Location:27752838
    Loricrin; Major keratinocyte cell envelope protein
  3. NM_080306.4NP_525045.3  pecanex, isoform F [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_525045.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O46074, P18490, Q95TI6, Q9W506
    UniProtKB/TrEMBL
    M9PGB7
    Conserved Domains (2) summary
    pfam05041
    Location:25192742
    Pecanex_C; Pecanex protein (C-terminus)
    pfam15847
    Location:27752838
    Loricrin; Major keratinocyte cell envelope protein