Tekt5l1 tektin 5 like 1 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Tekt5l1provided by RGD
Official Full Name: tektin 5 like 1provided by RGD
Primary source: RGD:1565057
See related: AllianceGenome:RGD:1565057
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: RGD1565057
Summary: Predicted to be involved in cilium assembly and cilium movement involved in cell motility. Predicted to be located in cytoplasm. Predicted to be active in microtubule cytoskeleton and sperm flagellum. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

Location:: 1q52

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	1	NC_086019.1 (236103061..236118680, complement)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	1	NC_051336.1 (226689519..226705125, complement)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	1	NC_005100.4 (247094538..247110187, complement)

Chromosome 1 - NC_086019.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RGD

Process	Evidence Code	Pubs
involved_in cilium assembly	IBA Inferred from Biological aspect of Ancestor more info
involved_in cilium assembly	IEA Inferred from Electronic Annotation more info
involved_in cilium movement involved in cell motility	IBA Inferred from Biological aspect of Ancestor more info
involved_in flagellated sperm motility	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
is_active_in microtubule cytoskeleton	IBA Inferred from Biological aspect of Ancestor more info
located_in microtubule cytoskeleton	IEA Inferred from Electronic Annotation more info
is_active_in sperm flagellum	IBA Inferred from Biological aspect of Ancestor more info
located_in sperm flagellum	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: similar to hypothetical protein FLJ32871

Names: tektin-5-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001402563.1 → NP_001389492.1 similar to hypothetical protein FLJ32871

Status: VALIDATED

Source sequence(s)

JAXUCZ010000001

UniProtKB/TrEMBL

A0A8I6AFC0

Conserved Domains (1) summary

pfam03148
Location:93 → 338

Tektin; Tektin family
NM_001402564.1 → NP_001389493.1 similar to hypothetical protein FLJ32871

Status: VALIDATED

Source sequence(s)

JAXUCZ010000001

UniProtKB/TrEMBL

A0A8I6AFC0

Conserved Domains (1) summary

pfam03148
Location:93 → 338

Tektin; Tektin family

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

NC_086019.1 Reference GRCr8

Range

236103061..236118680 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_063264501.1 → XP_063120571.1 similar to hypothetical protein FLJ32871 isoform X1

UniProtKB/TrEMBL

A0A8I6AFC0
XM_063264505.1 → XP_063120575.1 similar to hypothetical protein FLJ32871 isoform X1

UniProtKB/TrEMBL

A0A8I6AFC0