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Glyatl1 glycine-N-acyltransferase-like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 309227, updated on 9-Dec-2024

Summary

Official Symbol
Glyatl1provided by RGD
Official Full Name
glycine-N-acyltransferase-like 1provided by RGD
Primary source
RGD:1564894
See related
EnsemblRapid:ENSRNOG00000036622 AllianceGenome:RGD:1564894
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1564894
Summary
Predicted to enable N-acyltransferase activity. Predicted to be active in mitochondrion. [provided by Alliance of Genome Resources, Dec 2024]
Expression
Restricted expression toward (RPKM 687.1) See more
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Genomic context

See Glyatl1 in Genome Data Viewer
Location:
1q43
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (219091987..219117363)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (209667315..209692697)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (229039889..229055127)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene FAM111 trypsin like peptidase A Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like Neighboring gene glycine-N-acyltransferase Neighboring gene olfactory receptor family 5 subfamily B member 95 like 1

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General gene information

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables N-acyltransferase activity  
enables glycine N-acyltransferase activity  
Component Evidence Code Pubs
is_active_in mitochondrion  

General protein information

Preferred Names
glycine-N-acyltransferase-like 1
Names
Glycine N-acyltransferase-like protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001126278.1NP_001119750.1  glycine-N-acyltransferase-like 1

    See identical proteins and their annotated locations for NP_001119750.1

    Status: PROVISIONAL

    Source sequence(s)
    BC160862
    UniProtKB/TrEMBL
    A6I0E3, B1H250
    Conserved Domains (2) summary
    pfam08444
    Location:207295
    Gly_acyl_tr_C; Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region
    pfam06021
    Location:1206
    Gly_acyl_tr_N; Aralkyl acyl-CoA:amino acid N-acyltransferase

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    219091987..219117363
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039079883.2XP_038935811.1  glycine-N-acyltransferase-like 1 isoform X1

    UniProtKB/TrEMBL
    A6I0E3, B1H250
    Related
    ENSRNOP00000051684.2, ENSRNOT00000054800.4
    Conserved Domains (2) summary
    pfam08444
    Location:207295
    Gly_acyl_tr_C; Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region
    pfam06021
    Location:1206
    Gly_acyl_tr_N; Aralkyl acyl-CoA:amino acid N-acyltransferase
  2. XM_039079886.2XP_038935814.1  glycine-N-acyltransferase-like 1 isoform X2

    UniProtKB/TrEMBL
    A6I0E3
    Conserved Domains (2) summary
    pfam08444
    Location:174262
    Gly_acyl_tr_C; Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region
    pfam06021
    Location:1173
    Gly_acyl_tr_N; Aralkyl acyl-CoA:amino acid N-acyltransferase
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