Kctd14 potassium channel tetramerization domain containing 14 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Kctd14provided by RGD
Official Full Name: potassium channel tetramerization domain containing 14provided by RGD
Primary source: RGD:1306430
See related: AllianceGenome:RGD:1306430
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary: Predicted to be involved in protein homooligomerization. Orthologous to human KCTD14 (potassium channel tetramerization domain containing 14). [provided by Alliance of Genome Resources, Nov 2024]
Expression: Biased expression in Testes (RPKM 33.1), Lung (RPKM 22.1) and 9 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: 1q32

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	1	NC_086019.1 (161172906..161177914)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	1	NC_051336.1 (151761688..151766693)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	1	NC_005100.4 (162418389..162424322)

Chromosome 1 - NC_086019.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

RH137588 (e-PCR)
- UniSTS:219675

AI449310 (e-PCR)
- UniSTS:159670

Gene Ontology Provided by RGD

Process	Evidence Code	Pubs
involved_in protein homooligomerization	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: BTB/POZ domain-containing protein KCTD14

Names: potassium channel tetramerisation domain containing 14

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001400257.1 → NP_001387186.1 BTB/POZ domain-containing protein KCTD14

Status: VALIDATED

Source sequence(s)

JAXUCZ010000001

UniProtKB/TrEMBL

F1M0C4

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

NC_086019.1 Reference GRCr8

Range

161172906..161177914

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_039101080.2 → XP_038957008.1 BTB/POZ domain-containing protein KCTD14 isoform X1

UniProtKB/TrEMBL

A6I697

Conserved Domains (1) summary

cl38908
Location:1 → 83

BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
XM_063262787.1 → XP_063118857.1 BTB/POZ domain-containing protein KCTD14 isoform X1