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Tlnrd1 talin rod domain containing 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 308795, updated on 4-Jan-2025

Summary

Official Symbol
Tlnrd1provided by RGD
Official Full Name
talin rod domain containing 1provided by RGD
Primary source
RGD:1311666
See related
EnsemblRapid:ENSRNOG00000012349 AllianceGenome:RGD:1311666
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Mesdc1
Summary
Predicted to enable actin binding activity and identical protein binding activity. Predicted to be located in stress fiber. Orthologous to human TLNRD1 (talin rod domain containing 1). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See Tlnrd1 in Genome Data Viewer
Location:
1q31
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (147273475..147275494, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (137864340..137866359, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (146027821..146029840, complement)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene cilia and flagella associated protein 161 Neighboring gene ring finger and CHY zinc finger domain containing 1, pseudogene 1 Neighboring gene mesoderm development LRP chaperone Neighboring gene uncharacterized LOC134485147

Genomic regions, transcripts, and products

General gene information

Markers

Clone Names

  • MGC109280

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables actin binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables actin binding ISO
Inferred from Sequence Orthology
more info
 
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in stress fiber ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
talin rod domain-containing protein 1
Names
mesoderm development candidate 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001013149.1NP_001013167.1  talin rod domain-containing protein 1

    See identical proteins and their annotated locations for NP_001013167.1

    Status: PROVISIONAL

    Source sequence(s)
    BC091313
    UniProtKB/TrEMBL
    F7FGC8, Q5BJV3
    Related
    ENSRNOP00000016455.1, ENSRNOT00000016455.5

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    147273475..147275494 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)