Tmem60 transmembrane protein 60 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Tmem60provided by RGD
Official Full Name: transmembrane protein 60provided by RGD
Primary source: RGD:1308939
See related: EnsemblRapid:ENSRNOG00000013510 AllianceGenome:RGD:1308939
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: RGD1308939
Summary: Predicted to be located in membrane. Orthologous to human TMEM60 (transmembrane protein 60). [provided by Alliance of Genome Resources, Jan 2025]
Expression: Biased expression in Testes (RPKM 67.2), Muscle (RPKM 66.0) and 9 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: 4q11

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	4	NC_086022.1 (15102168..15107023, complement)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	4	NC_051339.1 (14210029..14214884, complement)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	4	NC_005103.4 (10818024..10822879, complement)

Chromosome 4 - NC_086022.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

RH129372 (e-PCR)
- UniSTS:212679

RH129169 (e-PCR)
- UniSTS:212477

Gene Ontology Provided by RGD

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: transmembrane protein 60

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001191610.1 → NP_001178539.1 transmembrane protein 60

Status: PROVISIONAL

Source sequence(s)

JAXUCZ010000004

UniProtKB/TrEMBL

A6K5C9, D3ZUD9

Related

ENSRNOP00000018040.4, ENSRNOT00000018040.8

Conserved Domains (1) summary

pfam10269
Location:25 → 118

Tmemb_185A; Transmembrane Fragile-X-F protein