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Galk1l1 galactokinase 1 like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 296256, updated on 4-Jan-2025

Summary

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Official Symbol
Galk1l1provided by RGD
Official Full Name
galactokinase 1 like 1provided by RGD
Primary source
RGD:1565143
See related
AllianceGenome:RGD:1565143
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1565143; AABR07054286.1
Summary
Predicted to enable ATP binding activity. [provided by Alliance of Genome Resources, Jan 2025]
Expression
Biased expression in Testes (RPKM 139.4), Kidney (RPKM 37.4) and 6 other tissues See more
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Genomic context

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See Galk1l1 in Genome Data Viewer
Location:
3q41
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (159805611..159844867, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (139345180..139365440, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (146298634..146347604, complement)

Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene S100 calcium binding protein A11, pseudogene 3 Neighboring gene uncharacterized LOC102555661 Neighboring gene uncharacterized LOC134486180 Neighboring gene galactokinase 1, pseudogene 4 Neighboring gene ribosomal protein SA, pseudogene 6 Neighboring gene cystatin F Neighboring gene adipocyte plasma membrane associated protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
sperm motility kinase X

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086021.1 Reference GRCr8

    Range
    159805611..159844867 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063285058.1 → XP_063141128.1  sperm motility kinase X isoform X1

  2. XM_063285054.1 → XP_063141124.1  sperm motility kinase X isoform X1

  3. XM_056985407.2 → XP_056841387.1  sperm motility kinase X isoform X1

  4. XM_063285049.1 → XP_063141119.1  sperm motility kinase X isoform X1

  5. XM_063285051.1 → XP_063141121.1  sperm motility kinase X isoform X1

  6. XM_056985393.2 → XP_056841373.1  sperm motility kinase X isoform X1

  7. XM_056985396.2 → XP_056841376.1  sperm motility kinase X isoform X1

  8. XM_063285061.1 → XP_063141131.1  sperm motility kinase X isoform X1

  9. XM_063285057.1 → XP_063141127.1  sperm motility kinase X isoform X1

  10. XM_056985402.2 → XP_056841382.1  sperm motility kinase X isoform X1

  11. XM_063285052.1 → XP_063141122.1  sperm motility kinase X isoform X1

  12. XM_063285056.1 → XP_063141126.1  sperm motility kinase X isoform X1

  13. XM_063285060.1 → XP_063141130.1  sperm motility kinase X isoform X1

  14. XM_063285053.1 → XP_063141123.1  sperm motility kinase X isoform X1

  15. XM_063285055.1 → XP_063141125.1  sperm motility kinase X isoform X1

  16. XM_056985405.2 → XP_056841385.1  sperm motility kinase X isoform X1

  17. XM_063285050.1 → XP_063141120.1  sperm motility kinase X isoform X1

  18. XM_063285070.1 → XP_063141140.1  sperm motility kinase X isoform X2

    UniProtKB/TrEMBL
    A0A0G2K2T8

  19. XM_063285074.1 → XP_063141144.1  sperm motility kinase X isoform X2

    UniProtKB/TrEMBL
    A0A0G2K2T8

  20. XM_063285068.1 → XP_063141138.1  sperm motility kinase X isoform X2

    UniProtKB/TrEMBL
    A0A0G2K2T8

  21. XM_063285065.1 → XP_063141135.1  sperm motility kinase X isoform X2

    UniProtKB/TrEMBL
    A0A0G2K2T8

  22. XM_063285071.1 → XP_063141141.1  sperm motility kinase X isoform X2

    UniProtKB/TrEMBL
    A0A0G2K2T8

  23. XM_063285063.1 → XP_063141133.1  sperm motility kinase X isoform X2

    UniProtKB/TrEMBL
    A0A0G2K2T8

  24. XM_063285073.1 → XP_063141143.1  sperm motility kinase X isoform X2

    UniProtKB/TrEMBL
    A0A0G2K2T8

  25. XM_063285075.1 → XP_063141145.1  sperm motility kinase X isoform X2

    UniProtKB/TrEMBL
    A0A0G2K2T8

  26. XM_063285066.1 → XP_063141136.1  sperm motility kinase X isoform X2

    UniProtKB/TrEMBL
    A0A0G2K2T8

  27. XM_063285064.1 → XP_063141134.1  sperm motility kinase X isoform X2

    UniProtKB/TrEMBL
    A0A0G2K2T8

  28. XM_063285062.1 → XP_063141132.1  sperm motility kinase X isoform X2

    UniProtKB/TrEMBL
    A0A0G2K2T8

  29. XM_063285072.1 → XP_063141142.1  sperm motility kinase X isoform X2

    UniProtKB/TrEMBL
    A0A0G2K2T8

  30. XM_063285067.1 → XP_063141137.1  sperm motility kinase X isoform X2

    UniProtKB/TrEMBL
    A0A0G2K2T8

  31. XM_063285059.1 → XP_063141129.1  sperm motility kinase X isoform X1

Nucleotide Protein Strain
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