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Slc22a2 solute carrier family 22 member 2 [ Rattus norvegicus (Norway rat) ]

Gene ID: 29503, updated on 4-Jan-2025

Summary

Official Symbol
Slc22a2provided by RGD
Official Full Name
solute carrier family 22 member 2provided by RGD
Primary source
RGD:61936
See related
EnsemblRapid:ENSRNOG00000016625 AllianceGenome:RGD:61936
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
OCT2; OCT2r; rOCT2
Summary
Enables several functions, including monoamine transmembrane transporter activity; organic cation transmembrane transporter activity; and toxin transmembrane transporter activity. Involved in several processes, including acetylcholine transport; histamine transport; and monoamine transport. Located in apical plasma membrane and basolateral plasma membrane. Is active in cholinergic synapse; presynaptic membrane; and synaptic vesicle membrane. Used to study acute kidney failure. Biomarker of cholestasis (multiple); hyperuricemia; and kidney failure (multiple). Human ortholog(s) of this gene implicated in acute kidney failure. Orthologous to human SLC22A2 (solute carrier family 22 member 2). [provided by Alliance of Genome Resources, Jan 2025]
Expression
Restricted expression toward (RPKM 601.3) See more
Orthologs
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Genomic context

See Slc22a2 in Genome Data Viewer
Location:
1q11
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (50668817..50711019, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (48121061..48163268, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (48318025..48360219, complement)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134482693 Neighboring gene small nucleolar RNA SNORA40 Neighboring gene insulin-like growth factor 2 receptor Neighboring gene solute carrier family 22 member 1 Neighboring gene uncharacterized LOC134484995 Neighboring gene protein LSM12 homolog pseudogene Neighboring gene heterogeneous nuclear ribonucleoprotein A1, pseudogene 10 Neighboring gene uncharacterized LOC102553224

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables L-amino acid transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
 
enables L-arginine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
enables L-arginine transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
 
enables acetylcholine transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
enables acetylcholine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
enables acetylcholine transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
 
enables amine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
enables amine transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
 
enables choline transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
enables choline transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
enables choline transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
 
enables efflux transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
enables efflux transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
 
enables monoamine transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
enables monoamine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
enables monoamine transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
 
enables monoamine transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables neurotransmitter transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
enables neurotransmitter transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
 
enables organic anion transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
 
enables organic anion transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables organic cation transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables organic cation transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
enables organic cation transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
 
enables prostaglandin transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
enables prostaglandin transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
 
enables prostaglandin transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables putrescine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
enables putrescine transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
 
enables putrescine transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables pyrimidine nucleoside transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
enables pyrimidine nucleoside transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
 
enables quaternary ammonium group transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
enables quaternary ammonium group transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
enables quaternary ammonium group transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
 
enables spermidine transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables steroid binding IDA
Inferred from Direct Assay
more info
PubMed 
enables thiamine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
enables thiamine transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
 
enables thiamine transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables toxin transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
enables toxin transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
enables toxin transmembrane transporter activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables toxin transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
 
enables xenobiotic transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
enables xenobiotic transmembrane transporter activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables xenobiotic transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
 
enables xenobiotic transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in L-alpha-amino acid transmembrane transport ISO
Inferred from Sequence Orthology
more info
 
involved_in L-arginine import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 
involved_in L-arginine import across plasma membrane ISO
Inferred from Sequence Orthology
more info
 
involved_in L-arginine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
involved_in acetylcholine transport IDA
Inferred from Direct Assay
more info
PubMed 
involved_in acetylcholine transport IEA
Inferred from Electronic Annotation
more info
 
involved_in acetylcholine transport ISO
Inferred from Sequence Orthology
more info
 
involved_in amine transport IEA
Inferred from Electronic Annotation
more info
 
involved_in amine transport ISO
Inferred from Sequence Orthology
more info
 
involved_in amino acid import across plasma membrane ISO
Inferred from Sequence Orthology
more info
 
involved_in cellular detoxification IDA
Inferred from Direct Assay
more info
PubMed 
involved_in cellular detoxification IEA
Inferred from Electronic Annotation
more info
 
involved_in cellular detoxification IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in cellular detoxification ISO
Inferred from Sequence Orthology
more info
 
involved_in choline transport IEA
Inferred from Electronic Annotation
more info
 
involved_in choline transport ISO
Inferred from Sequence Orthology
more info
 
involved_in dopamine transport IDA
Inferred from Direct Assay
more info
PubMed 
involved_in dopamine transport ISO
Inferred from Sequence Orthology
more info
 
involved_in dopamine uptake IEA
Inferred from Electronic Annotation
more info
 
involved_in dopamine uptake ISO
Inferred from Sequence Orthology
more info
 
involved_in epinephrine transport IDA
Inferred from Direct Assay
more info
PubMed 
involved_in epinephrine transport IEA
Inferred from Electronic Annotation
more info
 
involved_in epinephrine transport ISO
Inferred from Sequence Orthology
more info
 
involved_in export across plasma membrane IEA
Inferred from Electronic Annotation
more info
 
involved_in export across plasma membrane ISO
Inferred from Sequence Orthology
more info
 
involved_in histamine transport IDA
Inferred from Direct Assay
more info
PubMed 
involved_in histamine transport ISO
Inferred from Sequence Orthology
more info
 
involved_in histamine uptake IEA
Inferred from Electronic Annotation
more info
 
involved_in histamine uptake ISO
Inferred from Sequence Orthology
more info
 
involved_in monoatomic cation transport IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within monoatomic cation transport ISO
Inferred from Sequence Orthology
more info
 
involved_in neurotransmitter transport ISO
Inferred from Sequence Orthology
more info
 
involved_in norepinephrine transport IDA
Inferred from Direct Assay
more info
PubMed 
involved_in norepinephrine transport ISO
Inferred from Sequence Orthology
more info
 
involved_in norepinephrine uptake IEA
Inferred from Electronic Annotation
more info
 
involved_in norepinephrine uptake ISO
Inferred from Sequence Orthology
more info
 
involved_in organic cation transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in organic cation transport IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within organic cation transport ISO
Inferred from Sequence Orthology
more info
 
involved_in organic cation transport ISO
Inferred from Sequence Orthology
more info
 
involved_in prostaglandin transport IEA
Inferred from Electronic Annotation
more info
 
involved_in prostaglandin transport ISO
Inferred from Sequence Orthology
more info
 
involved_in prostaglandin transport ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in putrescine transport IEA
Inferred from Electronic Annotation
more info
 
involved_in putrescine transport ISO
Inferred from Sequence Orthology
more info
 
involved_in putrescine transport ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in quaternary ammonium group transport IDA
Inferred from Direct Assay
more info
PubMed 
involved_in quaternary ammonium group transport IEA
Inferred from Electronic Annotation
more info
 
involved_in serotonin transport IDA
Inferred from Direct Assay
more info
PubMed 
involved_in serotonin transport ISO
Inferred from Sequence Orthology
more info
 
involved_in serotonin transport ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in serotonin uptake IEA
Inferred from Electronic Annotation
more info
 
involved_in serotonin uptake ISO
Inferred from Sequence Orthology
more info
 
involved_in spermidine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
involved_in spermidine transport ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in thiamine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
involved_in thiamine transmembrane transport ISO
Inferred from Sequence Orthology
more info
 
involved_in thiamine transmembrane transport ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in xenobiotic transport IDA
Inferred from Direct Assay
more info
PubMed 
involved_in xenobiotic transport IEA
Inferred from Electronic Annotation
more info
 
involved_in xenobiotic transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in xenobiotic transport ISO
Inferred from Sequence Orthology
more info
 
involved_in xenobiotic transport across blood-brain barrier NAS
Non-traceable Author Statement
more info
PubMed 
Component Evidence Code Pubs
located_in apical plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in apical plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in basal plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in basolateral plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in basolateral plasma membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in cholinergic synapse IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in presynapse IEA
Inferred from Electronic Annotation
more info
 
is_active_in presynaptic membrane IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in synaptic vesicle membrane IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
solute carrier family 22 member 2
Names
organic cation transporter 2
solute carrier family 22 (organic cation transporter), member 2

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_031584.2NP_113772.1  solute carrier family 22 member 2

    See identical proteins and their annotated locations for NP_113772.1

    Status: PROVISIONAL

    Source sequence(s)
    D83044
    UniProtKB/Swiss-Prot
    P70485, P97558, Q9R0W2
    UniProtKB/TrEMBL
    A0A0G2JSP9, A6KJX5
    Related
    ENSRNOP00000023116.2, ENSRNOT00000023116.7
    Conserved Domains (2) summary
    cd06174
    Location:125492
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    TIGR00898
    Location:12525
    2A0119; cation transport protein

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    50668817..50711019 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)