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GVI51_M06259 40S ribosomal protein eS6 [ Nakaseomyces glabratus ]

Gene ID: 2891669, updated on 6-Dec-2024

Summary

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Gene symbol
GVI51_M06259
Gene description
40S ribosomal protein eS6
Locus tag
GVI51_M06259
See related
FungiDB:GVI51_M06259; VEuPathDB:GVI51_M06259
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Nakaseomyces glabratus (strain: ATCC 2001, nat-host: Homo sapiens, culture-collection: ATCC:2001, type-material: type material of Cryptococcus glabratus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces
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Genomic context

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See GVI51_M06259 in Genome Data Viewer
Location:
chromosome: M
Exon count:
2
Sequence:
Chromosome: M; NC_088963.1 (663804..665304, complement)

Chromosome M - NC_088963.1Genomic Context describing neighboring genes Neighboring gene mitofusin Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_088963.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo genome assembly of Candida glabrata reveals cell wall protein complement and structure of dispersed tandem repeat arrays. Xu Z, et al. Mol Microbiol, 2020 Jun. PMID 32068314
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • CAGL0M06303g
    Ortholog(s) have structural constituent of ribosome activity, role in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) and cytosolic small ribosomal subunit, small-subunit processome localization

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
40S ribosomal protein eS6
XP_449621.1
  • CAGL0M06303g
    Ortholog(s) have structural constituent of ribosome activity, role in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) and cytosolic small ribosomal subunit, small-subunit processome localization

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_088963.1 Reference assembly

    Range
    663804..665304 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_449621.1 → XP_449621.1  40S ribosomal protein eS6 [Nakaseomyces glabratus]

    See identical proteins and their annotated locations for XP_449621.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q6FJH3
    UniProtKB/TrEMBL
    A0A0W0D3T5
    Conserved Domains (1) summary
    cl00931
    Location:1 → 220
    Ribosomal_S6e; Ribosomal protein S6e
Nucleotide Protein
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