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GVI51_L04345 40S ribosomal protein eS28 [ Nakaseomyces glabratus ]

Gene ID: 2890641, updated on 6-Dec-2024

Summary

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Gene symbol
GVI51_L04345
Gene description
40S ribosomal protein eS28
Locus tag
GVI51_L04345
See related
FungiDB:GVI51_L04345; VEuPathDB:GVI51_L04345
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Nakaseomyces glabratus (strain: ATCC 2001, nat-host: Homo sapiens, culture-collection: ATCC:2001, type-material: type material of Cryptococcus glabratus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces
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Genomic context

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See GVI51_L04345 in Genome Data Viewer
Location:
chromosome: L
Exon count:
1
Sequence:
Chromosome: L; NC_088962.1 (531244..531447, complement)

Chromosome L - NC_088962.1Genomic Context describing neighboring genes Neighboring gene dynamin-like GTPase SEY1 Neighboring gene mRNA-processing endoribonuclease Neighboring gene glutamine--tRNA ligase Neighboring gene sphinganine kinase LCB4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_088962.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo genome assembly of Candida glabrata reveals cell wall protein complement and structure of dispersed tandem repeat arrays. Xu Z, et al. Mol Microbiol, 2020 Jun. PMID 32068314
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • CAGL0L04510g
    Ortholog(s) have structural constituent of ribosome activity

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal small subunit assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
40S ribosomal protein eS28
XP_448971.1
  • CAGL0L04510g
    Ortholog(s) have structural constituent of ribosome activity

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_088962.1 Reference assembly

    Range
    531244..531447 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_448971.1 → XP_448971.1  40S ribosomal protein eS28 [Nakaseomyces glabratus]

    See identical proteins and their annotated locations for XP_448971.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q6FLC3
    UniProtKB/TrEMBL
    A0A0W0CZC9
    Conserved Domains (1) summary
    cd04457
    Location:8 → 67
    S1_S28E; S28E, S1-like RNA-binding domain. S1-like RNA-binding domains are found in a wide variety of RNA-associated proteins. S28E protein is a component of the 30S ribosomal subunit. S28E is highly conserved among archaea and eukaryotes. S28E may control ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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