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RPS11B 40S ribosomal protein uS17 [ Nakaseomyces glabratus ]

Gene ID: 2890530, updated on 6-Dec-2024

Summary

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Gene symbol
RPS11B
Gene description
40S ribosomal protein uS17
Locus tag
GVI51_K11583
See related
FungiDB:GVI51_K11583; VEuPathDB:GVI51_K11583
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Nakaseomyces glabratus (strain: ATCC 2001, nat-host: Homo sapiens, culture-collection: ATCC:2001, type-material: type material of Cryptococcus glabratus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces
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Genomic context

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See RPS11B in Genome Data Viewer
Location:
chromosome: K
Exon count:
2
Sequence:
Chromosome: K; NC_088961.1 (1132967..1133983)

Chromosome K - NC_088961.1Genomic Context describing neighboring genes Neighboring gene serine--tRNA ligase SES1 Neighboring gene tRNA-Val Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_088961.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo genome assembly of Candida glabrata reveals cell wall protein complement and structure of dispersed tandem repeat arrays. Xu Z, et al. Mol Microbiol, 2020 Jun. PMID 32068314
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • CAGL0K11748g
    Protein component of the small (40S) ribosomal subunit; expression upregulated in biofilm vs planktonic cell culture

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
40S ribosomal protein uS17
XP_448726.1
  • CAGL0K11748g
    Protein component of the small (40S) ribosomal subunit; expression upregulated in biofilm vs planktonic cell culture

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_088961.1 Reference assembly

    Range
    1132967..1133983
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_448726.1 → XP_448726.1  40S ribosomal protein uS17 [Nakaseomyces glabratus]

    See identical proteins and their annotated locations for XP_448726.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0W0DDQ1, Q6FM18
    Conserved Domains (1) summary
    PTZ00241
    Location:4 → 156
    PTZ00241; 40S ribosomal protein S11; Provisional
Nucleotide Protein
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