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GVI51_F01881 Rab family GTPase SEC4 [ Nakaseomyces glabratus ]

Gene ID: 2887974, updated on 6-Dec-2024

Summary

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Gene symbol
GVI51_F01881
Gene description
Rab family GTPase SEC4
Locus tag
GVI51_F01881
See related
FungiDB:GVI51_F01881; VEuPathDB:GVI51_F01881
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Nakaseomyces glabratus (strain: ATCC 2001, nat-host: Homo sapiens, culture-collection: ATCC:2001, type-material: type material of Cryptococcus glabratus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces
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Genomic context

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See GVI51_F01881 in Genome Data Viewer
Location:
chromosome: F
Exon count:
1
Sequence:
Chromosome: F; NC_088956.1 (235193..235840)

Chromosome F - NC_088956.1Genomic Context describing neighboring genes Neighboring gene cohesin subunit SMC1 Neighboring gene uncharacterized protein Neighboring gene vacuolar transporter chaperone Neighboring gene MutS family protein MSH4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_088956.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo genome assembly of Candida glabrata reveals cell wall protein complement and structure of dispersed tandem repeat arrays. Xu Z, et al. Mol Microbiol, 2020 Jun. PMID 32068314
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • CAGL0F02123g
    Ortholog(s) have GTP binding, GTPase activity

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein localization to plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle docking involved in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Rab family GTPase SEC4
XP_446065.1
  • CAGL0F02123g
    Ortholog(s) have GTP binding, GTPase activity

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_088956.1 Reference assembly

    Range
    235193..235840
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_446065.1 → XP_446065.1  Rab family GTPase SEC4 [Nakaseomyces glabratus]

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O42819
    UniProtKB/TrEMBL
    A0A0W0DKC7
    Conserved Domains (1) summary
    cd01867
    Location:18 → 183
    Rab8_Rab10_Rab13_like; Rab GTPase families 8, 10, 13 (Rab8, Rab10, Rab13)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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