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ERG3 C-5 sterol desaturase [ Nakaseomyces glabratus ]

Gene ID: 2887958, updated on 6-Dec-2024

Summary

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Gene symbol
ERG3
Gene description
C-5 sterol desaturase
Locus tag
GVI51_F01551
See related
FungiDB:GVI51_F01551; VEuPathDB:GVI51_F01551
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Nakaseomyces glabratus (strain: ATCC 2001, nat-host: Homo sapiens, culture-collection: ATCC:2001, type-material: type material of Cryptococcus glabratus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces
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Genomic context

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See ERG3 in Genome Data Viewer
Location:
chromosome: F
Exon count:
1
Sequence:
Chromosome: F; NC_088956.1 (200772..201866, complement)

Chromosome F - NC_088956.1Genomic Context describing neighboring genes Neighboring gene glycine hydroxymethyltransferase SHM2 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene SAGA complex subunit SPT8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_088956.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo genome assembly of Candida glabrata reveals cell wall protein complement and structure of dispersed tandem repeat arrays. Xu Z, et al. Mol Microbiol, 2020 Jun. PMID 32068314
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

  • CAGL0F01793g
    Delta 5,6 sterol desaturase; C-5 sterol desaturase; predicted transmembrane domain and endolasmic reticulum (ER) binding motif; gene used for molecular typing of C. glabrata strain isolates

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables C-5 sterol desaturase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-5 sterol desaturase
XP_446050.1
  • CAGL0F01793g
    Delta 5,6 sterol desaturase; C-5 sterol desaturase; predicted transmembrane domain and endolasmic reticulum (ER) binding motif; gene used for molecular typing of C. glabrata strain isolates

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_088956.1 Reference assembly

    Range
    200772..201866 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_446050.1 → XP_446050.1  C-5 sterol desaturase [Nakaseomyces glabratus]

    See identical proteins and their annotated locations for XP_446050.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P50860
    UniProtKB/TrEMBL
    N1NVD5
    Conserved Domains (1) summary
    COG3000
    Location:99 → 351
    ERG3; Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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