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GVI51_E04873 alpha-mannosidase [ Nakaseomyces glabratus ]

Gene ID: 2887300, updated on 6-Dec-2024

Summary

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Gene symbol
GVI51_E04873
Gene description
alpha-mannosidase
Locus tag
GVI51_E04873
See related
FungiDB:GVI51_E04873; VEuPathDB:GVI51_E04873
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Nakaseomyces glabratus (strain: ATCC 2001, nat-host: Homo sapiens, culture-collection: ATCC:2001, type-material: type material of Cryptococcus glabratus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces
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Genomic context

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See GVI51_E04873 in Genome Data Viewer
Location:
chromosome: E
Exon count:
1
Sequence:
Chromosome: E; NC_088955.1 (518389..521634, complement)

Chromosome E - NC_088955.1Genomic Context describing neighboring genes Neighboring gene holo-[acyl-carrier-protein] synthase Neighboring gene protein geranylgeranyltransferase type I subunit CDC43 Neighboring gene carbonyl reductase (NADPH-dependent) ARI1 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_088955.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo genome assembly of Candida glabrata reveals cell wall protein complement and structure of dispersed tandem repeat arrays. Xu Z, et al. Mol Microbiol, 2020 Jun. PMID 32068314
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • CAGL0E05148g
    Ortholog(s) have alpha-mannosidase activity, role in oligosaccharide catabolic process and cytosol, fungal-type vacuole membrane localization

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-mannosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mannose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in fungal-type vacuole membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-mannosidase
XP_445912.1
  • CAGL0E05148g
    Ortholog(s) have alpha-mannosidase activity, role in oligosaccharide catabolic process and cytosol, fungal-type vacuole membrane localization

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_088955.1 Reference assembly

    Range
    518389..521634 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_445912.1 → XP_445912.1  alpha-mannosidase [Nakaseomyces glabratus]

    See identical proteins and their annotated locations for XP_445912.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0W0D338, Q6FV32
    Conserved Domains (1) summary
    COG0383
    Location:49 → 1079
    AMS1; Alpha-mannosidase [Carbohydrate transport and metabolism]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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