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Ccdc191 coiled-coil domain containing 191 [ Rattus norvegicus (Norway rat) ]

Gene ID: 288106, updated on 4-Jan-2025

Summary

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Official Symbol
Ccdc191provided by RGD
Official Full Name
coiled-coil domain containing 191provided by RGD
Primary source
RGD:1566314
See related
EnsemblRapid:ENSRNOG00000057815 AllianceGenome:RGD:1566314
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1566314
Summary
Orthologous to human CCDC191 (coiled-coil domain containing 191). [provided by Alliance of Genome Resources, Jan 2025]
Expression
Biased expression in Testes (RPKM 52.6), Kidney (RPKM 24.8) and 9 other tissues See more
Orthologs
human mouse all
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Genomic context

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See Ccdc191 in Genome Data Viewer
Location:
11q21
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 11 NC_086029.1 (70241562..70312288, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 11 NC_051346.1 (56735655..56806372, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 11 NC_005110.4 (61678138..61748773, complement)

Chromosome 11 - NC_086029.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134481070 Neighboring gene GRAM domain containing 1C Neighboring gene zinc finger DHHC-type palmitoyltransferase 23 Neighboring gene small nucleolar RNA, H/ACA box 84 Neighboring gene queuine tRNA-ribosyltransferase accessory subunit 2 Neighboring gene uncharacterized LOC134480927

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
coiled-coil domain-containing protein 191
Names
queuine tRNA-ribosyltransferase domain containing 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001427765.1 → NP_001414694.1  coiled-coil domain-containing protein 191

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000011
    UniProtKB/TrEMBL
    A0A1W2Q6A6
    Related
    ENSRNOP00000076188.2, ENSRNOT00000093431.3

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086029.1 Reference GRCr8

    Range
    70241562..70312288 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008768763.4 → XP_008766985.1  coiled-coil domain-containing protein 191 isoform X1

    See identical proteins and their annotated locations for XP_008766985.1

    UniProtKB/TrEMBL
    A0A0G2JUG8, A0A1W2Q6A6
    Related
    ENSRNOP00000069093.1, ENSRNOT00000078879.3
    Conserved Domains (3) summary
    pfam02463
    Location:194 → 834
    SMC_N; RecF/RecN/SMC N terminal domain
    cd16269
    Location:789 → 800
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:710 → 808
    GBP_C; Guanylate-binding protein, C-terminal domain

  2. XM_039088899.1 → XP_038944827.1  coiled-coil domain-containing protein 191 isoform X3

    UniProtKB/TrEMBL
    A6IR20
    Conserved Domains (3) summary
    PTZ00121
    Location:373 → 496
    PTZ00121; MAEBL; Provisional
    COG4942
    Location:271 → 455
    EnvC; Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning]
    pfam08457
    Location:465 → 617
    Sfi1; Sfi1 spindle body protein

  3. XM_039088898.2 → XP_038944826.1  coiled-coil domain-containing protein 191 isoform X2

    Conserved Domains (2) summary
    PTZ00121
    Location:225 → 771
    PTZ00121; MAEBL; Provisional
    pfam17380
    Location:228 → 440
    DUF5401; Family of unknown function (DUF5401)

RNA

  1. XR_005491341.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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