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2610318N02Rikl RIKEN cDNA 2610318N02 gene like [ Rattus norvegicus (Norway rat) ]

Gene ID: 287935, updated on 27-Nov-2024

Summary

Official Symbol
2610318N02Riklprovided by RGD
Official Full Name
RIKEN cDNA 2610318N02 gene likeprovided by RGD
Primary source
RGD:1308065
See related
EnsemblRapid:ENSRNOG00000026918 AllianceGenome:RGD:1308065
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1308065
Expression
Restricted expression toward (RPKM 307.3) See more
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Genomic context

See 2610318N02Rikl in Genome Data Viewer
Location:
11q23
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 11 NC_086029.1 (97383363..97400092)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 11 NC_051346.1 (83879178..83895877)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 11 NC_005110.4 (88128785..88145488)

Chromosome 11 - NC_086029.1Genomic Context describing neighboring genes Neighboring gene YdjC chitooligosaccharide deacetylase homolog Neighboring gene coiled-coil domain containing 116 Neighboring gene stromal cell-derived factor 2-like 1 Neighboring gene microRNA 301b Neighboring gene microRNA 130b Neighboring gene peptidylprolyl isomerase like 2 Neighboring gene yippee-like 1

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
uncharacterized protein LOC287935

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001077666.1NP_001071134.1  uncharacterized protein LOC287935

    See identical proteins and their annotated locations for NP_001071134.1

    Status: PREDICTED

    Source sequence(s)
    BC127537
    UniProtKB/TrEMBL
    A0JPQ2, A6JSN1
    Related
    ENSRNOP00000040753.3, ENSRNOT00000046664.5

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086029.1 Reference GRCr8

    Range
    97383363..97400092
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063270320.1XP_063126390.1  uncharacterized protein LOC287935 isoform X1

    UniProtKB/TrEMBL
    A6JSN2, G3V9A1
  2. XM_008768856.4XP_008767078.1  uncharacterized protein LOC287935 isoform X1

    See identical proteins and their annotated locations for XP_008767078.1

    UniProtKB/TrEMBL
    A6JSN1, A6JSN2, G3V9A1
    Related
    ENSRNOP00000102367.1, ENSRNOT00000134461.1