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Pyy peptide YY [ Rattus norvegicus (Norway rat) ]

Gene ID: 287730, updated on 27-Nov-2024

Summary

Official Symbol
Pyyprovided by RGD
Official Full Name
peptide YYprovided by RGD
Primary source
RGD:1593289
See related
EnsemblRapid:ENSRNOG00000020877 AllianceGenome:RGD:1593289
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Yy; GHYY; RATGHYY; peptide-YY
Summary
Predicted to enable neuropeptide Y receptor binding activity and neuropeptide hormone activity. Involved in negative regulation of response to food. Located in extracellular space. Orthologous to several human genes including PYY (peptide YY). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Thymus (RPKM 2.2), Liver (RPKM 1.3) and 5 other tissues See more
Orthologs
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Genomic context

See Pyy in Genome Data Viewer
Location:
10q32.1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (87561347..87562470, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (87061155..87062278, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (90047989..90049155, complement)

Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene MAGUK p55 scaffold protein 2 Neighboring gene pancreatic polypeptide Neighboring gene uncharacterized LOC120095294 Neighboring gene uncharacterized LOC134480880 Neighboring gene N-acetylglutamate synthase

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables G protein-coupled receptor binding IEA
Inferred from Electronic Annotation
more info
 
enables G protein-coupled receptor binding ISO
Inferred from Sequence Orthology
more info
 
enables hormone activity IEA
Inferred from Electronic Annotation
more info
 
enables neuropeptide Y receptor binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables neuropeptide Y receptor binding ISO
Inferred from Sequence Orthology
more info
 
enables neuropeptide hormone activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables neuropeptide hormone activity ISO
Inferred from Sequence Orthology
more info
 
enables neuropeptide hormone activity TAS
Traceable Author Statement
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within eating behavior ISO
Inferred from Sequence Orthology
more info
 
involved_in feeding behavior IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in negative regulation of response to food IDA
Inferred from Direct Assay
more info
PubMed 
involved_in neuropeptide signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular space IDA
Inferred from Direct Assay
more info
PubMed 
located_in extracellular space ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
peptide YY
Names
peptide tyrosine tyrosine
peptide tyrosine-tyrosine (YY)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001034080.1NP_001029252.1  peptide YY precursor

    See identical proteins and their annotated locations for NP_001029252.1

    Status: VALIDATED

    Source sequence(s)
    AA998735, BF551062
    UniProtKB/Swiss-Prot
    P10631, Q3C1E8
    UniProtKB/TrEMBL
    A6HJG5, F1LSR6
    Related
    ENSRNOP00000028323.4, ENSRNOT00000028323.8
    Conserved Domains (1) summary
    cd00126
    Location:2964
    PAH; Pancreatic Hormone domain, a regulator of pancreatic and gastrointestinal functions; neuropeptide Y (NPY)b, peptide YY (PYY), and pancreatic polypetide (PP) are closely related; propeptide is enzymatically cleaved to yield the mature active peptide with ...

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086028.1 Reference GRCr8

    Range
    87561347..87562470 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)