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Or7a38c olfactory receptor family 7 subfamily A member 38C [ Rattus norvegicus (Norway rat) ]

Gene ID: 287002, updated on 27-Nov-2024

Summary

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Official Symbol
Or7a38cprovided by RGD
Official Full Name
olfactory receptor family 7 subfamily A member 38Cprovided by RGD
Primary source
RGD:727865
See related
EnsemblRapid:ENSRNOG00000078168 AllianceGenome:RGD:727865
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Olr1082
Summary
Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. [provided by RefSeq, Jul 2008]
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Genomic context

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See Or7a38c in Genome Data Viewer
Location:
7q11
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (11315267..11316220, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (10664669..10665622, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (13553010..13553963, complement)

Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 7 subfamily A member 38B Neighboring gene igE-binding protein-like Neighboring gene olfactory receptor family 7 subfamily A member 38 Neighboring gene olfactory receptor family 7 subfamily A member 39

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A novel multigene family may encode odorant receptors: a molecular basis for odor recognition. Buck L, et al. Cell, 1991 Apr 5. PMID 1840504
  2. Evolution of odorant receptors expressed in mammalian testes. Branscomb A, et al. Genetics, 2000 Oct. PMID 11014824, Free PMC Article
  3. Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Gibbs RA, et al. Nature, 2004 Apr 1. PMID 15057822
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
  
enables odorant binding ISS
Inferred from Sequence or Structural Similarity
more info
  
enables olfactory receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables olfactory receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in detection of chemical stimulus involved in sensory perception of smell IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
olfactory receptor 1082
Names
olfactory protein
olfactory receptor-like protein F12

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_173335.2 → NP_775457.2  olfactory receptor 1082

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000007
    UniProtKB/Swiss-Prot
    P23268
    UniProtKB/TrEMBL
    A0A0G2KAB5
    Related
    ENSRNOP00000105303.1, ENSRNOT00000139119.1
    Conserved Domains (1) summary
    cd15234
    Location:27 → 302
    7tmA_OR7-like; olfactory receptor family 7 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086025.1 Reference GRCr8

    Range
    11315267..11316220 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P23268.1 GenPept UniProtKB/Swiss-Prot:P23268

Gene LinkOut

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