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glmZ [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 2847678, updated on 3-Dec-2024

Summary

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Official Symbol
glmZ
Primary source
ECOCYC:G0-8873
Locus tag
b4456
See related
ASAP:ABE-0047274
Gene type
ncRNA
RNA name
other
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3795; k19; psrA20; ryiA; sraJ
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Genomic context

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Sequence:
NC_000913.3 (3986432..3986603)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative anaerobic sulfatase maturation enzyme AslB Neighboring gene putative sulfatase AslA Neighboring gene protein HemY Neighboring gene PF04375 family protein HemX

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structure of a bacterial ribonucleoprotein complex central to the control of cell envelope biogenesis. Islam MS, et al. EMBO J, 2023 Jan 16. PMID 36504162, Free PMC Article
  2. Global analysis of posttranscriptional regulation by GlmY and GlmZ in enterohemorrhagic Escherichia coli O157:H7. Gruber CC, et al. Infect Immun, 2015 Apr. PMID 25605763, Free PMC Article
  3. Posttranscriptional control of microbe-induced rearrangement of host cell actin. Gruber CC, et al. mBio, 2014 Jan 14. PMID 24425733, Free PMC Article
  4. Feedback regulation of small RNA processing by the cleavage product. Durica-Mitic S, et al. RNA Biol, 2019 Aug. PMID 31116083, Free PMC Article
  5. Noncoding RNA control of the making and breaking of sugars. Görke B, et al. Genes Dev, 2008 Nov 1. PMID 18981470

See all (16) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Structure of a bacterial ribonucleoprotein complex central to the control of cell envelope biogenesis.
    Title: Structure of a bacterial ribonucleoprotein complex central to the control of cell envelope biogenesis.
  2. accumulation of GlmZ* prevents complete GlmZ turnover. This mechanism may serve to adjust a robust glmS basal expression level that is buffered against fluctuations in RapZ availability.
    Title: Feedback regulation of small RNA processing by the cleavage product.
  3. This shows that GlmY and GlmZ promote expression of the curli adhesin, repress the expression of tryptophan metabolism genes, and promote the expression of acid resistance genes and the non-LEE-encoded effector NleA.
    Title: Global analysis of posttranscriptional regulation by GlmY and GlmZ in enterohemorrhagic Escherichia coli O157:H7.
  4. These findings reveal that GlmY and GlmZ small RNAs act in concert through different molecular mechanisms to coordinate bacterial attachment to mammalian cells.
    Title: Posttranscriptional control of microbe-induced rearrangement of host cell actin.
  5. Analysis of how GlmZ, GlmY and PAP I act together in the regulation of glmS expression.
    Title: The small RNA GlmY acts upstream of the sRNA GlmZ in the activation of glmS expression and is subject to regulation by polyadenylation in Escherichia coli.
Submit: New GeneRIF Correction

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