U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

AIF1 allograft inflammatory factor 1 [ Bos taurus (domestic cattle) ]

Gene ID: 280989, updated on 29-Jan-2025

Summary

Go to the top of the page Help
Official Symbol
AIF1provided by VGNC
Official Full Name
allograft inflammatory factor 1provided by VGNC
Primary source
VGNC:VGNC:25759
See related
BGD:BT11903; Ensembl:ENSBTAG00000020554
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
AIF
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See AIF1 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 23 NC_037350.1 (27685447..27704365, complement)

Chromosome 23 - NC_037350.1Genomic Context describing neighboring genes Neighboring gene apolipoprotein M Neighboring gene BAG cochaperone 6 Neighboring gene proline rich coiled-coil 2A Neighboring gene small nucleolar RNA SNORA38 Neighboring gene natural cytotoxicity triggering receptor 3 Neighboring gene leukocyte specific transcript 1 Neighboring gene uncharacterized LOC100847561 Neighboring gene lymphotoxin beta Neighboring gene tumor necrosis factor

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_037350.1 Chromosome 23 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Increased messenger RNA for allograft inflammatory factor-1, LERK-5, and a novel gene in 17.5-day relative to 15.5-day bovine embryos. Glover MD, et al. Biol Reprod, 2003 Sep. PMID 12773430
  2. Functional expression of bcl-2 protein family and AIF in bovine mammary tissue in early lactation. Colitti M, et al. J Dairy Res, 2004 Feb. PMID 15068062
  3. YAC/BAC contig spanning the MHC class III region of cattle. Gelhaus A, et al. Cytogenet Genome Res, 2006. PMID 16974083
  4. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament bundle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ruffle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ruffle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
allograft inflammatory factor 1
Names
AIF-1
anti-inflammatory factor 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_173985.2 → NP_776410.1  allograft inflammatory factor 1

    See identical proteins and their annotated locations for NP_776410.1

    Status: PROVISIONAL

    Source sequence(s)
    AF348450
    UniProtKB/Swiss-Prot
    Q9BDK2
    UniProtKB/TrEMBL
    A0AAA9SXF4
    Related
    ENSBTAP00070019528.1, ENSBTAT00070033190.1
    Conserved Domains (1) summary
    cl25352
    Location:46 → 113
    EFh_PEF; The penta-EF hand (PEF) family

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037350.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    27685447..27704365 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059880203.1 → XP_059736186.1  allograft inflammatory factor 1 isoform X2

  2. XM_024983376.2 → XP_024839144.1  allograft inflammatory factor 1 isoform X1

    Conserved Domains (1) summary
    cl25352
    Location:119 → 186
    EFh_PEF; The penta-EF hand (PEF) family
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9BDK2.1 GenPept UniProtKB/Swiss-Prot:Q9BDK2

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials