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Fam131c family with sequence similarity 131, member C [ Mus musculus (house mouse) ]

Gene ID: 277743, updated on 27-Nov-2024

Summary

Official Symbol
Fam131cprovided by MGI
Official Full Name
family with sequence similarity 131, member Cprovided by MGI
Primary source
MGI:MGI:2685539
See related
Ensembl:ENSMUSG00000006218 AllianceGenome:MGI:2685539
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm693
Summary
Orthologous to human FAM131C (family with sequence similarity 131 member C). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in CNS E18 (RPKM 15.4), stomach adult (RPKM 9.5) and 12 other tissues See more
Orthologs
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Genomic context

See Fam131c in Genome Data Viewer
Location:
4 D3; 4 73.88 cM
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (141095503..141111485)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (141368192..141384174)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_11901 Neighboring gene Eph receptor A2 Neighboring gene predicted gene 13076 Neighboring gene STARR-positive B cell enhancer ABC_E4697 Neighboring gene chloride channel, voltage-sensitive Ka Neighboring gene predicted gene, 34693

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001085513.3NP_001078982.1  protein FAM131C

    See identical proteins and their annotated locations for NP_001078982.1

    Status: VALIDATED

    Source sequence(s)
    AL670285
    Consensus CDS
    CCDS38938.1
    UniProtKB/TrEMBL
    A2ADB2
    Related
    ENSMUSP00000006380.5, ENSMUST00000006380.5
    Conserved Domains (1) summary
    pfam15010
    Location:78184
    FAM131; Putative cell signalling

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    141095503..141111485
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)