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phiLC3p23 helix-turn-helix transcriptional regulator [ Lactococcus phage phiLC3 ]

Gene ID: 2769033, updated on 31-May-2023

Summary

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Gene symbol
phiLC3p23
Gene description
helix-turn-helix transcriptional regulator
Locus tag
phiLC3p23
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Lactococcus phage phiLC3 (strain: IMN-C3, nat-host: Lactococcus lactis subsp. cremoris)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Siphoviridae
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Genomic context

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Sequence:
NC_005822.1 (11708..12244)

NC_005822.1Genomic Context describing neighboring genes Neighboring gene DUF1642 domain-containing protein Neighboring gene orf141 Neighboring gene hypothetical protein Neighboring gene DUF1140 family protein Neighboring gene hypothetical protein Neighboring gene orf143 Neighboring gene orf95 Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_005822.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete genome sequence of the Lactococcus lactis temperate phage phiLC3: comparative analysis of phiLC3 and its relatives in lactococci and streptococci. Blatny JM, et al. Virology, 2004 Jan 5. PMID 14972551
  2. Transcriptional analysis of the genetic elements involved in the lysogeny/lysis switch in the temperate lactococcal bacteriophage phiLC3, and identification of the Cro-like protein ORF76. Blatny JM, et al. Mol Genet Genomics, 2003 Jul. PMID 12759744
  3. Analysis of a regulator involved in the genetic switch between lysis and lysogeny of the temperate Lactococcus lactis phage phi LC3. Blatny JM, et al. Mol Genet Genomics, 2001 Mar. PMID 11370866
  4. A highly efficient and stable system for site-specific integration of genes and plasmids into the phage phiLC3 attachment site (attB) of the Lactococcus lactis chromosome. Lillehaug D, et al. Gene, 1997 Mar 25. PMID 9099871
  5. Characterization of genetic elements required for site-specific integration of the temperate lactococcal bacteriophage phi LC3 and construction of integration-negative phi LC3 mutants. Lillehaug D, et al. J Bacteriol, 1993 Mar. PMID 8449882, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
helix-turn-helix transcriptional regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_005822.1 Reference assembly

    Range
    11708..12244
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_996697.1 helix-turn-helix transcriptional regulator [Lactococcus phage phiLC3]

    See identical proteins and their annotated locations for NP_996697.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q77MW2
    Conserved Domains (1) summary
    smart00530
    Location:26 → 75
    HTH_XRE; Helix-turn-helix XRE-family like proteins
Nucleotide Protein
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