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Fancd2 Fancd2 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 2768674, updated on 4-Jan-2025

Summary

Official Symbol
Fancd2provided by FlyBase
Official Full Name
Fancd2provided by FlyBase
Primary source
FLYBASE:FBgn0038827
Locus tag
Dmel_CG17269
See related
AllianceGenome:FB:FBgn0038827
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG17269; CG31192; CG31194; Dmel\CG17269; dmFANCD2; FAD; FancD2; FANCD2
Summary
Predicted to enable DNA polymerase binding activity. Involved in interstrand cross-link repair and mitotic intra-S DNA damage checkpoint signaling. Predicted to be active in condensed chromosome and nucleus. Used to study Fanconi anemia and Fanconi anemia complementation group D2. Human ortholog(s) of this gene implicated in Fanconi anemia; Fanconi anemia complementation group D2; and breast cancer. Orthologous to human FANCD2 (FA complementation group D2). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See Fancd2 in Genome Data Viewer
Location:
93A1-93A1; 3-69 cM
Exon count:
14
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (20810804..20816190, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (16636526..16641912, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Syncrip Neighboring gene Tak1-like 1 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables DNA polymerase binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 
involved_in DNA repair IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in double-strand break repair involved in meiotic recombination IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in homologous chromosome pairing at meiosis IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in interstrand cross-link repair IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in interstrand cross-link repair IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in interstrand cross-link repair IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in mitotic intra-S DNA damage checkpoint signaling IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in mitotic intra-S DNA damage checkpoint signaling IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in condensed chromosome IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IC
Inferred by Curator
more info
PubMed 

General protein information

Preferred Names
Fancd2
Names
CG17269-PA
Fancd2-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    20810804..20816190 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_206524.2NP_996246.1  Fancd2 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_996246.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8IN46, Q8MYL1
    Conserved Domains (1) summary
    cl17018
    Location:1321422
    FANC; Fanconi anemia ID complex proteins FANCI and FANCD2