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Major facilitator superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 2745964, updated on 18-Sep-2024

Summary

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Official Full Name
Major facilitator superfamily protein
Primary source
TAIR:AT3G54450
Locus tag
AT3G54450
See related
Araport:AT3G54450
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
6
Sequence:
Chromosome: 3; NC_003074.8 (20158440..20162005)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene homolog of carrot EP3-3 chitinase Neighboring gene glycoside hydrolase family 2 protein Neighboring gene SHI-related sequence 6 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein Neighboring gene uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS) Neighboring gene SKP1/ASK-interacting protein 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_202702.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables dipeptide transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
enables tripeptide transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Major facilitator superfamily protein
NP_974431.2
  • Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G72125.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    20158440..20162005
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_202702.3 → NP_974431.2  Major facilitator superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974431.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q5PP22, Q9M1I2
    UniProtKB/TrEMBL
    A0A178VHG5, A0A5S9XKR9
    Conserved Domains (1) summary
    cd17417
    Location:16 → 541
    MFS_NPF5; NRT1/PTR family (NPF), subfamily 5 of the Major Facilitator Superfamily of transporters
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9M1I2.1

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