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SAG20 senescence associated gene 20 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 2745879, updated on 18-Sep-2024

Summary

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Official Symbol
SAG20
Official Full Name
senescence associated gene 20
Primary source
TAIR:AT3G10985
Locus tag
AT3G10985
See related
Araport:AT3G10985
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABIDOPSIS THALIANA WOUND-INDUCED PROTEIN 12; ATWI-12; senescence associated gene 20; WI12; WOUND-INDUCED PROTEIN 12
Summary
A senescence-associated gene whose expression is induced in response to treatment with Nep1, a fungal protein that causes necrosis.
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Genomic context

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See SAG20 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_003074.8 (3442237..3443680)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene PLAC8 family protein Neighboring gene LURP-one-like protein (DUF567) Neighboring gene F-box associated ubiquitination effector family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_202550.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in leaf senescence IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within response to fungus IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in response to molecule of fungal origin IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in response to nematode IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in response to ozone IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
senescence associated gene 20
NP_974279.1
  • senescence associated gene 20 (SAG20); CONTAINS InterPro DOMAIN/s: Wound-induced protein, Wun1, subgroup (InterPro:IPR016533), Wound-induced protein, Wun1 (InterPro:IPR009798); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein (TAIR:AT5G01740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    3442237..3443680
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_202550.2 → NP_974279.1  senescence associated gene 20 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974279.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q94AK6, Q9SRK9
    UniProtKB/TrEMBL
    A0A178V9X9, A0A5S9XAZ8
    Conserved Domains (1) summary
    pfam07107
    Location:1 → 110
    WI12; Wound-induced protein WI12
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q94AK6.1

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