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jph-1 Junctophilin-1 [ Caenorhabditis elegans ]

Gene ID: 266843, updated on 4-Jan-2025

Summary

Official Symbol
jph-1
Official Full Name
Junctophilin-1
Primary source
WormBase:WBGene00002179
Locus tag
CELE_T22C1.7
See related
AllianceGenome:WB:WBGene00002179
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable structural molecule activity. Involved in locomotion and positive regulation of engulfment of apoptotic cell. Predicted to be located in membrane. Predicted to be part of junctional membrane complex. Predicted to be active in endoplasmic reticulum membrane and plasma membrane. Is expressed in body wall musculature; muscle cell; nerve ring; and neurons. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease axonal type 2K; Huntington's disease-like 2; dilated cardiomyopathy 2E; and hypertrophic cardiomyopathy 17. Orthologous to several human genes including JPH3 (junctophilin 3). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

See jph-1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
10
Sequence:
Chromosome: I; NC_003279.8 (7946193..7951593, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene TFIIIC_sub6 domain-containing protein Neighboring gene Transport and Golgi organization protein 1 homolog Neighboring gene ncRNA Neighboring gene ncRNA

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables structural molecule activity TAS
Traceable Author Statement
more info
PubMed 
Process Evidence Code Pubs
involved_in locomotion IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in muscle contraction TAS
Traceable Author Statement
more info
PubMed 
involved_in positive regulation of engulfment of apoptotic cell IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in endoplasmic reticulum membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 
part_of junctional membrane complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of junctional membrane complex IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane TAS
Traceable Author Statement
more info
PubMed 

General protein information

Preferred Names
Junctophilin-1
NP_492193.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    7946193..7951593 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_059792.9NP_492193.2  Junctophilin-1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_492193.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q22667, Q966S4
    Conserved Domains (2) summary
    smart00698
    Location:5874
    MORN; Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases
    pfam02493
    Location:306328
    MORN; MORN repeat