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asRNA:CR46194 antisense RNA:CR46194 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 26067505, updated on 9-Dec-2024

Summary

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Official Symbol
asRNA:CR46194provided by FlyBase
Official Full Name
antisense RNA:CR46194provided by FlyBase
Primary source
FLYBASE:FBgn0267913
Locus tag
Dmel_CR46194
See related
AllianceGenome:FB:FBgn0267913
Gene type
ncRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CR46194; Dmel\CR46194; lncRNA:CR46194
Summary
Predicted to be involved in miRNA-mediated post-transcriptional gene silencing. Predicted to be part of RISC complex. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See asRNA:CR46194 in Genome Data Viewer
Location:
48E4-48E4; 2-66 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (12169558..12171706, complement)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Ornithine decarboxylase antizyme Neighboring gene Small ribonucleoprotein particle protein SmD3 Neighboring gene mir-281-2 stem loop Neighboring gene mir-281-1 stem loop Neighboring gene Chaperonin containing TCP1 subunit 5 Neighboring gene antisense RNA:CR45264 Neighboring gene Endonuclease G Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NT_033778.4 Chromosome 2R Reference Release 6 plus ISO1 MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article
  2. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • alternate names: long non-coding RNA:CR46194
  • asRNA:CR46194-RA; Dmel\asRNA:CR46194-RA; CR46194-RA; Dmel\CR46194-RA
  • asRNA:CR46194-RB; Dmel\asRNA:CR46194-RB; CR46194-RB; Dmel\CR46194-RB

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in miRNA-mediated post-transcriptional gene silencing IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of RISC complex IEA
Inferred from Electronic Annotation
more info
  

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    12169558..12171706 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_133114.1 RNA Sequence

    Status: REVIEWED

  2. NR_133113.1 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases