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lncRNA:CR45918 long non-coding RNA:CR45918 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 26067246, updated on 9-Dec-2024

Summary

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Official Symbol
lncRNA:CR45918provided by FlyBase
Official Full Name
long non-coding RNA:CR45918provided by FlyBase
Primary source
FLYBASE:FBgn0267578
Locus tag
Dmel_CR45918
See related
AllianceGenome:FB:FBgn0267578
Gene type
ncRNA
RNA name
lncRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CR45918; Dmel\CR45918; pri-mir-987
Summary
Predicted to be involved in miRNA-mediated post-transcriptional gene silencing. Predicted to be part of RISC complex. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See lncRNA:CR45918 in Genome Data Viewer
Location:
45C5-45C6; 2-60 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (9310329..9313237, complement)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene DNA fragmentation factor-related protein 2 Neighboring gene Myd88 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene mir-987 stem loop Neighboring gene Odorant receptor 45a Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NT_033778.4 Chromosome 2R Reference Release 6 plus ISO1 MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • lncRNA:CR45918-RA; Dmel\lncRNA:CR45918-RA; CR45918-RA; Dmel\CR45918-RA

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in miRNA-mediated post-transcriptional gene silencing IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of RISC complex IEA
Inferred from Electronic Annotation
more info
  

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    9310329..9313237 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_133108.1 RNA Sequence

    Status: REVIEWED

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.